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Comparative analysis of the complete mitochondrial genomes of five Achilidae species (Hemiptera: Fulgoroidea) and other Fulgoroidea reveals conserved mitochondrial genome organization

机译:比较五个线虫科(半翅目:Fulgoroidea)和其他Fulgoroidea的完整线粒体基因组揭示了保守的线粒体基因组结构

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摘要

In the present study, the complete mitochondrial genomes (mitogenomes) of five Achilidae (Hemiptera: Fulgoroidea), Betatropis formosana, two new species (Magadhaideus luodiana sp. nov and Peltatavertexalis horizontalis sp. nov), Plectoderini sp. and Paracatonidia sp., were sequenced for the first time through next-generation sequencing. The five mitogenomes ranged from 15,214 to 16,216 bp in length, with the typical gene content and arrangement usually observed in Hexapods. The motif “ATGATAA” between atp8 and atp6 was found in all the analyzed species. An overlap “AAGCTTA” between trnW and trnC was observed in the mitogenomes of most Fulgoroidea. The structural and compositional analyses of 26 Fulgoroidea mitogenomes, including the gene rearrangement of five tRNAs (trnW, trnC and trnY; trnT and trnP), the A + T content and AT-skew of the whole mitogenomes, and the nuclear acid and amino acid compositions of the protein-coding genes (PCGs), revealed family-level differences between Delphacidae and other families (Achilidae, Flatidae, Fulgoridae, Issidae and Ricaniidae). Phylogenetic analyses of 13 protein-coding genes from 26 Fulgoroidea species by maximum likelihood and Bayesian Inference were consistent and well supported the basal position of Delphacidae, a close affinity among the families Flatidae, Issidae and Ricaniidae, and a close relationship between Achilidae and Fulgoridae.
机译:在本研究中,五个线虫(半翅目:Fulgoroidea),锥贝纲,两个新种(Magadhaideus luodiana sp.nov和Peltatavertexalis horizo​​ntalis sp.nov),Plectoderini sp。的完整线粒体基因组(有丝分裂基因组)。拟南芥和Paracatonidia sp。,通过下一代测序首次测序。五个有丝分裂基因组的长度在15214到16216 bp之间,典型的基因含量和排列通常在六足动物中观察到。在所有分析的物种中都发现atp8和atp6之间的基序“ ATGATAA”。在大多数侧耳的有丝分裂基因组中,在trnW和trnC之间观察到了重叠的“ AAGCTTA”。对26个Fulgoroidea有丝分裂基因组进行结构和组成分析,包括5个tRNA(trnW,trnC和trnY; trnT和trnP)的基因重排,整个有丝分裂基因组的A + T含量和AT偏斜以及核酸和氨基酸蛋白质编码基因(PCG)的组成揭示了Delphacidae和其他家族((科,Flatidae,Fulgoridae,Issidae和Ricaniidae)之间的家族水平差异。系统进化分析最大的可能性和贝叶斯推论从26个Fulgoroidea物种的13个蛋白质编码基因是一致的,并很好地支持了Delphacidae的基础位置,Flatidae,Issidae和Ricaniidae家族之间的密切亲缘关系以及Achilidae和Fulgoridae之间的密切关系。

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