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Field sampling marine plankton for biodiscovery

机译:现场采样海洋浮游生物以进行生物发现

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摘要

Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples.
机译:微藻和浮游生物可以是丰富的生物活性来源。但是,在实验室条件下诱导次级代谢产物的生产可能很困难。绕过此问题的一种简单方法是在野外收集生物质并筛选生物活性。因此,从挪威北部和斯匹次卑尔根沿海三个地区的散装净样品被收集,提取和分级。来自大规模培养的硅藻Porosira glacialis菌株的生物质样品用作与田间样品比较的参考。生物活性的筛选是在四个治疗领域内进行的:13种测定:抗菌,抗癌,抗糖尿病和抗氧化。我们使用高分辨率-质谱(HR-MS)分析了样品的代谢谱。主成分分析表明,田间样品和光生物反应器培养物之间的代谢物谱存在显着差异。此外,与光生物反应器样品相比,活性成分的数量和生物活性的程度在现场是不同的。我们在所有样品中发现了不同程度的生物活性,这表明可以使用复杂的海洋样品来调查否则无法获得的来源的生物活性。此外,我们假设在田间样品中可能已经激活了在单一培养物中受控生长下原本就沉默的代谢途径。

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