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Identification of the laccase-like multicopper oxidase gene family of sweet cherry (Prunus avium L.) and expression analysis in six ancient Tuscan varieties

机译:甜樱桃(Prunus avium L.)漆酶样多铜氧化酶基因家族的鉴定及在六个古代托斯卡纳品种中的表达分析

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摘要

Laccase-like multicopper oxidases (LMCOs) are versatile enzymes used as biocatalysts performing the oxidation of different substrates of industrial relevance, with or without the intervention of a mediator. They have attracted a lot of interest for biotechnological applications in light of their eco-friendliness: they indeed oxidize the substrate(s) by coupling the four electron reduction of the final acceptor, molecular oxygen (O2), to water. Plant LMCOs represent a still poorly studied, important class of oxidoreductases controlling e.g. the post-harvest quality of fruits and enabling the tailoring of designer energy crops. We here sought to identify the LMCOs in Prunus avium L., whose fruits are rich in bioactive molecules, but are also highly perishable. The goal was to analyze them using bioinformatics (phylogenetic and in silico structural analyses) and to perform a targeted expression study on a subset of genes in six ancient varieties from Tuscany, all threatened by genetic erosion. These sweet cherry varieties contain higher amount of bioactive molecules, as compared to commercial counterparts. The results shown demonstrate strikingly different gene expression patterns in the six ancient varieties (‘Benedetta’, ‘Carlotta’, ‘Crognola’, ‘Maggiola’, ‘Morellona’, ‘Moscatella’) belonging to the Tuscan Regional Bank of Germplasm, as compared to a widely used commercial one (‘Durone’). The motivation of this study is the economic importance of P. avium and the involvement of LMCOs in post-harvest fruit parameters, like color. The results presented pave the way to follow-up researches on LMCOs of sweet cherry exploring post-harvest fruit parameters (e.g. anthocyanin stability responsible for pericarp browning and the preservation of the appealing red color), as well as developmental processes, like stony pit formation.
机译:漆酶样多铜氧化酶(LMCO)是用作生物催化剂的多功能酶,可在有或没有介体干预的情况下,对具有工业相关性的不同底物进行氧化。鉴于其生态友好性,它们在生物技术应用中引起了很多兴趣:它们确实通过将最终受体分子氧(O2)的四电子还原与水偶联来氧化底物。植物LMCO代表了仍然研究不足的重要类别的氧化还原酶,例如控制。水果的收获后质量,并能够定制设计师设计的能源作物。我们在这里试图鉴定李属李子中的LMCO,其果实富含生物活性分子,但也极易腐烂。目的是使用生物信息学(系统发育和计算机模拟结构分析)对它们进行分析,并对来自托斯卡纳的六个古老品种的基因子集进行有针对性的表达研究,所有这些都受到遗传侵蚀的威胁。与商业同类产品相比,这些甜樱桃品种含有更高数量的生物活性分子。显示的结果表明,相比之下,属于托斯卡纳地区种质银行的六个古代变种('Benedetta','Carlotta','Crognola','Maggiola','Morellona','Moscatella')的基因表达模式显着不同到广泛使用的商业广告(“ Durone”)。这项研究的动机是鸟笼假单胞菌的经济重要性以及LMCO在收获后果实参数(如颜色)中的参与。所提供的结果为甜樱桃的LMCO的后续研究铺平了道路,以探索收获后的果实参数(例如,花色苷的稳定性导致果皮褐变和保持诱人的红色)以及发育过程(如石质凹坑形成) 。

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