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Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas

机译:基于癌症基因组图谱数据挖掘的CD105在肾细胞癌中的表达及临床价值

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摘要

The objective of the present study was to assess the expression of CD105 and its association with overall survival in three subtypes of renal cell carcinoma (RCC), namely clear cell (cc)RCC, papillary (p)RCC and chromophobe (ch)RCC. Data regarding the transcriptome and copy number of genes in RCC tumor samples and survival were obtained from The Cancer Genome Atlas. Bioinformatics analysis revealed that CD105 is overexpressed in ccRCC tumor tissue vs. normal renal tissue, and a higher CD105 copy number in ccRCC tissues was significantly associated with longer patient survival. The effect of the mRNA expression of CD105 in all three types of RCC and the copy number in pRCC and chRCC on patient survival was insignificant, but certain trends were observed. In addition, CD105 mRNA expression was associated with the metastasis and tumor stage, as well as pathological stage in ccRCC and pRCC. Pathway enrichment analysis revealed that CD105 may, through translation initiation of associated genes, promote RCC progression. The results of the present study suggest that in RCC tumors, the association of CD105 with different stages is complex. To evaluate the role of CD105 in RCC, its function should be assessed in addition to its expression. The exact influence of CD105 mRNA expression and copy number in RCC tumors on patient survival and the underlying mechanisms require further elucidation.
机译:本研究的目的是评估CD105的表达及其与肾细胞癌(RCC)的三种亚型,即透明细胞(cc)RCC,乳头状(p)RCC和发色团(ch)RCC的关系。有关RCC肿瘤样品中基因的转录组和基因拷贝数以及存活率的数据是从The Cancer Genome Atlas获得的。生物信息学分析表明,与正常肾组织相比,ccRCC肿瘤组织中CD105过度表达,而ccRCC组织中较高的CD105拷贝数与更长的患者存活率显着相关。在所有三种类型的RCC中,CD105的mRNA表达以及pRCC和chRCC中的拷贝数对患者存活率的影响均不明显,但观察到某些趋势。此外,CD105 mRNA表达与ccRCC和pRCC的转移,肿瘤分期以及病理分期有关。途径富集分析表明,CD105可以通过相关基因的翻译起始来促进RCC进程。本研究的结果表明,在RCC肿瘤中,CD105与不同阶段的关联是复杂的。要评估CD105在RCC中的作用,除了其表达外,还应评估其功能。 RCC肿瘤中CD105 mRNA表达和拷贝数对患者生存率及其潜在机制的确切影响需要进一步阐明。

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