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Hemostasis Thrombosis and Vascular Biology: A sequence variation scan of the coagulation factor VIII (FVIII) structural gene and associations with plasma FVIII activity levels

机译:止血血栓形成和血管生物学:凝血因子VIII(FVIII)结构基因的序列变异扫描以及与血浆FVIII活性水平的关联

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摘要

Plasma factor VIII coagulant activity (FVIII:C) level is a highly heritable quantitative trait that is strongly correlated with thrombosis risk. Polymorphisms within only 1 gene, the ABO blood-group locus, have been unequivocally demonstrated to contribute to the broad population variability observed for this trait. Because less than 2.5% of the structural FVIII gene (F8) has been examined previously, we resequenced all known functional regions in 222 potentially distinct alleles from 137 unrelated nonhemophilic individuals representing 7 racial groups. Eighteen of the 47 variants identified, including 17 single-nucleotide polymorphisms (SNPs), were previously unknown. As the degree of linkage disequilibrium across F8 was weak overall, we used measured-genotype association analysis to evaluate the influence of each polymorphism on the FVIII:C levels in 398 subjects from 21 pedigrees known as the Genetic Analysis of Idiopathic Thrombophilia project (GAIT). Our results suggested that 92714C>G, a nonsynonymous SNP encoding the B-domain substitution D1241E, was significantly associated with FVIII:C level. After accounting for important covariates, including age and ABO genotype, the association persisted with each C-allele additively increasing the FVIII:C level by 14.3 IU dL−1 (P = .016). Nevertheless, because the alleles of 56010G>A, a SNP within the 3′ splice junction of intron 7, are strongly associated with 92714C>G in GAIT, additional studies are required to determine whether D1241E is itself a functional variant.
机译:血浆VIII因子凝血活性(FVIII:C)水平是高度可遗传的定量特征,与血栓形成风险密切相关。明确证明只有1个基因(ABO血型基因座)内的多态性有助于观察到该性状的广泛人群变异。因为以前检查不到结构FVIII基因(F8)的2.5%,所以我们对来自代表7个种族的137个无关非亲血性个体的222个潜在不同等位基因中的所有已知功能区进行了重新测序。以前未知的47种变体中有18种,包括17种单核苷酸多态性(SNP)。由于整个F8的连锁不平衡程度总体较弱,因此我们使用测基因型关联分析来评估21个谱系中398名受试者的每个多态性对FVIII:C水平的影响,这被称为“特发性血友病遗传分析”项目(GAIT) 。我们的结果表明,编码B结构域D1241E的非同义SNP 92714C> G与FVIII:C水平显着相关。在考虑了重要的协变量后,包括年龄和ABO基因型,该关联持续存在,每个C-等位基因将FVIII:C水平累加了14.3 IU dL -1 (P = .016)。尽管如此,由于56010G> A(内含子7的3'剪接点内的SNP)的等位基因与GAIT中的92714C> G密切相关,因此需要进行其他研究来确定D1241E是否本身是功能性变异体。

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