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Small Plasmids Harboring qnrB19: a Model for Plasmid Evolution Mediated by Site-Specific Recombination at oriT and Xer Sites

机译:携带qnrB19的小质粒:oriT和Xer部位的位点特异性重组介导的质粒进化模型

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摘要

Plasmids pPAB19-1, pPAB19-2, pPAB19-3, and pPAB19-4, isolated from Salmonella and Escherichia coli clinical strains from hospitals in Argentina, were completely sequenced. These plasmids include the qnrB19 gene and are 2,699, 3,082, 2,989, and 2,702 nucleotides long, respectively, and they share extensive homology among themselves and with other previously described small qnrB19-harboring plasmids. The genetic environment of qnrB19 in all four plasmids is identical to that in these other plasmids and in transposons such as Tn2012, Tn5387, and Tn5387-like. Nucleotide sequence comparisons among these and previously described plasmids showed a variable region characterized by being flanked by an oriT locus and a Xer recombination site. We propose that this arrangement could play a role in the evolution of plasmids and present a model for DNA swapping between plasmid molecules mediated by site-specific recombination events at oriT and a Xer target site.
机译:从阿根廷医院的沙门氏菌和大肠杆菌临床菌株中分离出的质粒pPAB19-1,pPAB19-2,pPAB19-3和pPAB19-4已完成完整测序。这些质粒包括qnrB19基因,分别长2699、3082、2989和2702个核苷酸,它们之间以及与其他先前描述的携带小qnrB19的小质粒具有广泛的同源性。在所有四个质粒中,qnrB19的遗传环境与这些其他质粒以及转座子(如Tn2012,Tn5387和Tn5387-like)中的遗传环境相同。这些质粒与先前描述的质粒之间的核苷酸序列比较显示了一个可变区,其特征是位于oriT基因座和Xer重组位点的两侧。我们建议这种安排可能在质粒的进化中发挥作用,并提出了一个模型,用于在oriT和Xer目标位点的位点特异性重组事件介导的质粒分子之间进行DNA交换。

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