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Quantitative Interpretation of the Randomness in Single Enzyme Turnover Times

机译:单一酶转换时间随机性的定量解释

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摘要

Fluctuating turnover times of a single enzyme become observable with the advent of modern cutting-edge, single enzyme experimental techniques. Although the conventional chemical kinetics and its modern generalizations could provide a good quantitative description for the mean of the enzymatic turnover times, to our knowledge there has not yet been a successful quantitative interpretation for the variance or the randomness of the enzymatic turnover times. In this review, we briefly review several theories in this field, and compare predictions of these theories to the randomness parameter data reported for β-galactosidase enzyme. We find the recently proposed kinetics for renewal reaction processes could provide an excellent quantitative interpretation of the randomness parameter data. From the analysis of the randomness parameter data of the single enzyme reaction, one can extract quantitative information about the mean lifetime of enzyme-substrate complex; the success or the failure probability of the catalytic reaction per each formation of ES complex; and the non-Poisson character of the reaction dynamics of the ES complex (which is beyond reach of the long-standing paradigm of the conventional chemical kinetics).
机译:随着现代尖端的单酶实验技术的出现,可以观察到一种酶的周转时间波动。尽管常规的化学动力学及其现代概括可以很好地定量描述酶促转化时间,但是据我们所知,还没有成功的定量解释酶促转化时间的方差或随机性。在这篇综述中,我们简要回顾了该领域的几种理论,并将这些理论的预测结果与针对β-半乳糖苷酶报道的随机性参数数据进行了比较。我们发现最近提出的用于更新反应过程的动力学可以为随机性参数数据提供出色的定量解释。通过对单一酶反应的随机性参数数据的分析,可以提取有关酶-底物复合物平均寿命的定量信息。每种ES配合物形成催化反应的成功或失败的可能性;以及ES络合物的反应动力学的非泊松特征(这是传统化学动力学长期以来的范式无法实现的)。

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