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Transport properties of single-file pores with two conformational states.

机译:具有两个构象状态的单锉毛孔的传输特性。

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摘要

Complex facilitative membrane transporters of specific ligands may operate via inner channels subject to conformational transitions. To describe some properties of these systems, we introduce here a kinetic model of coupled transport of two species, L and w, through a two-conformational pore. The basic assumptions of the model are: a) single-file of, at most, n molecules inside the channel; b) each pore state is open to one of the compartments only; c) there is at most only one vacancy per pore; d) inside the channel, a molecule of L occupies the same positions as a molecule of w; and e) there is at most only one molecule of L per pore. We develop a general representation of the kinetic diagram of the model that is formally similar to the one used to describe one-vacancy transport through a one-conformational single-file pore. In many cases of biological importance, L could be a hydrophilic (ionic or nonionic) ligand and w could be water. The model also finds application to describe solute (w) transport under saturation conditions. In this latter case, L would be another solute, or a tracer of w. We derive steady-state expressions for the fluxes of L and w, and for the permeability coefficients. The main results obtained from the analysis of the model are the following. 1) Under the condition of equilibrium of w, the expression derived for the flux of L is formally indistinguishable from the one obtainable from a standard four-state model of ligand transport mediated by a two-conformational transporter. 2) When L is a tracer of w, we can derive an expression for the ratio between the main isotope and tracer permeability coefficients (Pw/Pd). We find that the near-equilibrium permeability ratio satisfies (n - 1) < or = (Pw/Pd)eq < or = n, a result previously derived for the one-conformational, single-file pore for the case that n > or = 2. 3) The kinetic model studied here represents a generalization of the carrier concept. In fact, for the case that n = 1 (corresponding to the classical single-occupancy carrier), the near-equilibrium permeability ratio satisfies 0 < or = (Pw/Pd)eq < or = 1, which is characteristic of a carrier performing exchange-diffusion.
机译:特定配体的复杂易化膜转运蛋白可以通过内部通道进行构象转换。为了描述这些系统的某些特性,我们在这里介绍了两个物种L和w通过二构型孔耦合传输的动力学模型。该模型的基本假设是:a)通道内最多n个分子的单文件; b)每个孔隙状态仅对其中一个隔室开放; c)每个孔最多只有一个空位; d)在通道内,一个L分子与一个w分子占据相同的位置; e)每个孔最多只有一个L分子。我们开发了该模型的动力学图的一般表示形式,该形式与用于描述通过一构型单锉孔的一种空位运输的形式形式相似。在许多具有生物学重要性的情况下,L可以是亲水(离子或非离子)配体,w可以是水。该模型还可用于描述饱和条件下的溶质(w)运移。在后一种情况下,L将是另一个溶质或w的示踪剂。我们导出L和w的通量以及磁导率系数的稳态表达式。通过模型分析获得的主要结果如下。 1)在w平衡的条件下,从L的通量导出的表达式与从由两个构象的转运蛋白介导的标准配体转运的四态标准模型中得到的表达式在形式上是无法区分的。 2)当L是w的示踪剂时,我们可以得出主要同位素和示踪剂渗透系数(Pw / Pd)之比的表达式。我们发现,接近平衡的渗透率比满足(n-1)<或=(Pw / Pd)eq <或= n,这对于n>或=2。3)此处研究的动力学模型代表了载体概念的概括。实际上,对于n = 1(对应于经典单人载波)的情况,近平衡磁导率比满足0 <或=(Pw / Pd)eq <或= 1,这是载波执行的特性交换扩散。

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