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Proteome analysis of a recombinant Bacillus megaterium strain during heterologous production of a glucosyltransferase

机译:异源生产葡萄糖基转移酶过程中的重组巨大芽孢杆菌菌株的蛋白质组分析

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摘要

A recombinant B. megaterium strain was used for the heterologous production of a glucosyltransferase (dextransucrase). To better understand the physiological and metabolic responses of the host cell to cultivation and induction conditions, proteomic analysis was carried out by combined use of two-dimensional gel electrophoresis and mass spectrometry (2-DE/MS) for protein separation and identification.2-DE method was optimized for the separation of intracellular proteins. Since the genome of B. megaterium is not yet available, peptide sequencing using peptide fragment information obtained from nanoelectrospray ionization quadrupole-time-of-flight tandem mass spectrometry (ESI-QqTOF MS/MS) was applied for protein identification. 167 protein spots were identified as 149 individual proteins, including most enzymes involved in the central carbon metabolic pathways and many enzymes related to amino acid synthesis and protein synthesis. Based on the results a 2-DE reference map and a corresponding protein database were constructed for further proteomic approaches on B. megaterium.For the first time it became possible to perform comparative proteomic analysis on B. megaterium in a batch culture grown on glucose with xylose induction for dextrasucrase production. No significant differences were observed in the expression changes of enzymes of the glycolysis and TCA cycle, indicating that dextransucrase production, which amounted to only 2 % of the entire protein production, did not impose notable metabolic or energetic burdens on the central carbon metabolic pathway of the cells. However, a short-term up-regulation of aspartate aminotransferase, an enzyme closely related to dextransucrase production, in the induced culture demonstrated the feasibility to use 2-DE method for monitoring dextransucrase production. It was also observed that under the cultivation conditions used in this study B. megaterium tended to channel acetyl-CoA into pathways of polyhydroxybutyrate production. No expression increases were found with cytosolic chaperones such as GroEL and DnaK during dextransucrase production and secretion, whereas a strong up-regulation of the oligopeptide-binding protein OppA was observed in correlation with an increased secretion of dextransucrase into the culture medium.
机译:重组巨大芽孢杆菌菌株用于异源产生葡糖基转移酶(葡糖转移酶)。为了更好地了解宿主细胞对培养和诱导条件的生理和代谢反应,结合二维凝胶电泳和质谱(2-DE / MS)进行蛋白质组学分析,以分离和鉴定蛋白质。2- DE方法被优化用于细胞内蛋白质的分离。由于尚未存在巨大芽孢杆菌的基因组,因此使用从纳米电喷雾电离四极杆飞行时间串联质谱(ESI-QqTOF MS / MS)获得的肽片段信息进行肽测序用于蛋白质鉴定。 167个蛋白点被鉴定为149种单独的蛋白,包括参与中央碳代谢途径的大多数酶以及许多与氨基酸合成和蛋白合成有关的酶。根据这些结果,构建了2-DE参考图谱和相应的蛋白质数据库,用于在巨大芽孢杆菌上进行进一步的蛋白质组学研究。首次有可能在葡萄糖培养的分批培养物中对巨大芽孢杆菌进行比较蛋白质组学分析。木糖诱导用于葡聚糖生产。在糖酵解和TCA循环中酶的表达变化方面没有观察到显着差异,这表明右旋糖核酸酶的产量仅占整个蛋白质产量的2%,并没有对玉米的中央碳代谢途径施加明显的代谢或能量负担。细胞。然而,在诱导培养物中,天冬氨酸转氨酶(一种与葡聚糖转化酶生产密切相关的酶)的短期上调证明了使用2-DE方法监测葡聚糖转化酶生产的可行性。还观察到,在该研究中使用的培养条件下,巨大芽孢杆菌倾向于将乙酰辅酶A导入多羟基丁酸酯的生产途径。在葡糖转导酶的产生和分泌过程中,胞质伴侣(如GroEL和DnaK)未发现表达增加,而观察到寡肽结合蛋白OppA的强烈上调与葡聚糖转导到培养基中的分泌增加有关。

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