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The Mechanism Research of Qishen Yiqi Formula by Module-Network Analysis

机译:基于模块网络分析的芪参益气配方机理研究

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摘要

Qishen Yiqi formula (QSYQ) has the effect of tonifying Qi and promoting blood circulation, which is widely used to treat the cardiovascular diseases with Qi deficiency and blood stasis syndrome. However, the mechanism of QSYQ to tonify Qi and promote blood circulation is rarely reported at molecular or systems level. This study aimed to elucidate the mechanism of QSYQ based on the protein interaction network (PIN) analysis. The targets' information of the active components was obtained from ChEMBL and STITCH databases and was further used to search against protein-protein interactions by String database. Next, the PINs of QSYQ were constructed by Cytoscape and were analyzed by gene ontology enrichment analysis based on Markov Cluster algorithm. Finally, based on the topological parameters, the properties of scale-free, small world, and modularity of the QSYQ's PINs were analyzed. And based on function modules, the mechanism of QSYQ was elucidated. The results indicated that Qi-tonifying efficacy of QSYQ may be partly attributed to the regulation of amino acid metabolism, carbohydrate metabolism, lipid metabolism, and cAMP metabolism, while QSYQ improves the blood stasis through the regulation of blood coagulation and cardiac muscle contraction. Meanwhile, the “synergy” of formula compatibility was also illuminated.
机译:芪参益气方(QSYQ)具有补气益气,活血化瘀的作用,被广泛用于治疗气虚血瘀证的心血管疾病。然而,在分子或系统水平上很少报道QSYQ补气和促进血液循环的机制。这项研究旨在阐明基于蛋白质相互作用网络(PIN)分析的QSYQ机制。活性成分的靶标信息可从ChEMBL和STITCH数据库获得,并通过String数据库进一步用于搜索蛋白质与蛋白质的相互作用。接下来,通过Cytoscape构建QSYQ的PIN,并通过基于Markov聚类算法的基因本体富集分析对其进行分析。最后,基于拓扑参数,分析了QSYQ PIN的无标度,小世界和模块化特性。并基于功能模块,阐明了QSYQ的机制。结果表明,QSYQ的补气功效可能部分归因于氨基酸代谢,碳水化合物代谢,脂质代谢和cAMP代谢的调节,而QSYQ通过调节凝血和心肌收缩来改善血瘀。同时,配方兼容性的“协同作用”也得到了阐明。

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