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Topological Robustness of the Protein-Protein Interaction Networks

机译:蛋白质 - 蛋白质相互作用网络的拓扑鲁棒性

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The stability and fragility of four species' protein-protein interaction networks (PINs) are studied by investigating their robustness, i.e. their topological parameters retain a similar system behavior with respect to four different types of perturbations. Four types of perturbations are considered; that is (i) network nodes are randomly removed (failure), (ii) the most connected node is successively removed (attack), (iii) interaction edges are rewired randomly, and (iv) edges are randomly deleted. At most 50% of network nodes or edges are deleted or rewired. It is demonstrated that PINs are quite robust with respect to failure, attack, random rewiring and edge deletion, that is the average diameters for perturbed networks differ from the unperturbed cases have a difference less than 13%, which is relative small in comparison with WWW and the Internet results. These results suggest that PINs' network topologies are robust with respect to perturbations.
机译:通过研究其稳健性,研究了四种物种蛋白质 - 蛋白质相互作用网络(引脚)的稳定性和脆性,即它们的拓扑参数将相对于四种不同类型的扰动保留类似的系统行为。考虑了四种类型的扰动;即(i)网络节点被随机删除(失败),(ii)最终删除(攻击),(iii)随机重新连接的交互边缘,并且随机删除(iv)边缘。最多50%的网络节点或边缘被删除或重新延长。据证明引脚对于故障,攻击,随机重新加速和边缘删除是非常稳健的,即扰动网络的平均直径与未受干扰的情况不同的差异小于13%,与WWW相比,这相对小和互联网结果。这些结果表明引脚的网络拓扑对扰动具有鲁棒性。

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