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CELL TRACKING AND DATA ANALYSIS OF IN VITRO TUMOUR CELLS FROM TIME-LAPSE IMAGE SEQUENCES

机译:延时图像序列中体外肿瘤细胞的细胞跟踪及数据分析

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In this paper, we address the problem of the analysis of cellular phenotype from time-lapse image sequences using object tracking algorithms and feature extraction and classification. We discusses the application of an object tracking algorithm for in the analysis of high content cell-migration time-lapse image sequence of extremely motile cells; these cells are captured at low time-resolution. The small size of the objects and significant deformation of the object during the process renders the tracking as a non-trivial problem. To that end, the 'KDE Mean Shift', a real-time tracking solution, is adapted for our research. We illustrate that in a simulation experiment with artificial objects, with our algorithm an accuracy of over 90% can be established. Based on the tracking result, we propose several morphology and motility based measurements for the analysis of cell behaviour. Our analysis requires only initial manual interference; the majority of the processing is automated.
机译:在本文中,我们使用对象跟踪算法和特征提取和分类解决了从延时图像序列分析细胞表型的问题。我们讨论了对象跟踪算法在分析极其动机细胞的高含量细胞迁移时间流逝图像序列中的应用;这些细胞以低时间分辨率捕获。在过程中对象的小尺寸和对象的重大变形使得跟踪作为非琐碎问题。为此,“KDE平均转移”是一种实时跟踪解决方案,适用于我们的研究。我们说明,在具有人造物体的仿真实验中,通过我们的算法可以建立超过90%的精度。基于跟踪结果,我们提出了几种基于形态和动力基于细胞行为的测量。我们的分析只需要初始手动干扰;大部分加工是自动化的。

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