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Influence of Genetic Variance on Occupational Exposure Assessment for 1,6- Hexamethylene Diisocyanate

机译:遗传差异对1,6-六亚甲基二异氰酸酯职业接触评估的影响

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Significant differences in systemic response to xenobiotic exposure result from inter-individual genetic variation, but this variation is not included as a predictor of outcome in current exposure assessment models. We developed an approach to investigate and identify individual differences in genetic variation that influence biomarkers of exposure levels. Urine biomarker 1,6-hexamethylene diamine (HDA) was measured as a quantitative biological phenotype in a well-characterized population of automotive spray painters exposed to 1,6-hexamethylene diisocyanate (HDI). Exposure measurements were conducted over the course of an entire workday for up to three separate workdays that were spaced approximately one month apart. Inhalation exposure was measured using personal breathing-zone sampling while skin exposure was measured using tape-strip sampling. Urine samples were collected throughout the workday. Our innovative statistical modeling approach contains whole-genome markers along with other exposure predictors to determine the contribution of individual genetic variants to the observed urine biomarker levels among the exposed workers. The workers (n=33) were genotyped using genome-wide Affymetrix 6.0 microarrays, which feature -1.8 million genetic markers. PLINK was used for the candidate-gene and genome-wide association analysis, and the regression model that captured the most significant SNPs included population substructure, current smoking status, HDI exposure in the worker's breathing zone, and HDI skin exposure level as covariates. We identified 26 significant genome-wide variants that were associated with the urine HDA levels. Associations were adjusted for multiple comparisons at a false discovery rate (FDR) p<0.05. We also performed a candidate gene analysis using 19 genes encompassing 296 genetic markers associated with HDI exposure and occupational asthma selected from published literature. No candidate genes were significant at a FDR<0.05. The genetic contribution to variation observed in urine biomarker levels was determined using linear mixed-effects models (LAAM) that accounted for personal HDI exposure, individual exposure determinants, and whole-genome polymorphic markers. The biological relevance of significant variants was determined through predictive network analysis using GeneMania, Ingenuity Pathway Analysis, and Metacore. The most significant genetic marker, rs2697962 (p=9.0E-09), was also highly significant in the LAAM (p<0.0001). This marker is located in the 3'-UTR region of PRDAA2, which encodes a zinc finger protein that is a member of a nuclear histone/protein methyltransferase family. We found significant associations between urine HDA levels and genetic markers in this worker population. The results indicate that we can incorporate genetic markers with other exposure covariates in predictive exposure assessment models to better identify individual differences in biomarker levels.
机译:个体间遗传变异导致对异源生物暴露的全身反应的显着差异,但在当前的暴露评估模型中,这种变异未作为结果的预测因子。我们开发了一种方法来调查和识别影响暴露水平生物标志物的遗传变异中的个体差异。尿液生物标志物1,6-六亚甲基二胺(HDA)在暴露于1,6-六亚甲基二异氰酸酯(HDI)的汽车喷涂油漆工群体中,作为定量生物学表型进行了测量。在整个工作日的过程中进行了多达三个独立工作日(大约间隔一个月)的曝光测量。使用个人呼吸区采样来测量吸入暴露,而使用带状采样来测量皮肤暴露。在整个工作日收集尿液样本。我们创新的统计建模方法包含全基因组标记以及其他暴露预测指标,以确定个体遗传变异对暴露工人中观察到的尿液生物标记水平的影响。使用全基因组Affymetrix 6.0芯片对工人(n = 33)进行基因分型,该芯片具有-180万个遗传标记。 PLINK用于候选基因和全基因组关联分析,捕获最重要SNP的回归模型包括人群亚结构,当前吸烟状况,工人呼吸区域的HDI暴露以及HDI皮肤暴露水平作为协变量。我们确定了与尿液HDA水平相关的26个重要的全基因组变异。调整协会的虚假发现率(FDR)p <0.05的多个比较。我们还使用19种基因进行了候选基因分析,这些基因包括与HDI暴露和职业性哮喘相关的296个遗传标记,这些标记选自已出版的文献。 FDR <0.05时,没有候选基因显着。使用线性混合效应模型(LAAM)确定了尿液生物标志物水平对变异的遗传贡献,该模型考虑了个人HDI暴露,个体暴露决定因素和全基因组多态性标志物。通过使用GeneMania,Ingenuity Pathway Analysis和Metacore进行的预测性网络分析,确定了重要变异的生物学相关性。最重要的遗传标记rs2697962(p = 9.0E-09)在LAAM中也非常重要(p <0.0001)。该标记位于PRDAA2的3'-UTR区域,该区域编码一个锌指蛋白,该锌指蛋白是核组蛋白/蛋白质甲基转移酶家族的成员。我们发现该工人人群的尿液HDA水平与遗传标记之间存在显着关联。结果表明,我们可以将遗传标志物与其他暴露协变量合并到预测性暴露评估模型中,以更好地识别生物标志物水平的个体差异。

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