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Modeling Genetic Regulatory Networks by Sigmoidal Functions: A Joint Genetic Algorithm and Kalman Filtering Approach

机译:乙型函数建模遗传监管网络:一种联合遗传算法和卡尔曼滤波方法

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In this paper, the problem of genetic regulatory network inference from time series microarray experiment data is considered. A noisy sigmoidal model is proposed to include both system noise and measurement noise. In order to solve this nonlinear identification problem (with noise), a joint genetic algorithm and Kalman filtering approach is proposed. Genetic algorithm is applied to minimize the fitness function and Kalman filter is employed to estimate the weight parameters in each iteration. The effectiveness of the proposed method is demonstrated by using both synthetic data and microarray measurements.
机译:在本文中,考虑了遗传调节网络推断的问题。考虑了时间序列微阵列实验数据的研究。提出了一种嘈杂的S形模型,包括系统噪声和测量噪声。为了解决这种非线性识别问题(用噪声),提出了一种联合遗传算法和卡尔曼滤波方法。遗传算法应用于最小化健身功能,使用卡尔曼滤波器来估计每次迭代中的权重参数。通过使用合成数据和微阵列测量来证明所提出的方法的有效性。

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