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METHOD FOR DETECTING CHROMOSOMAL STRUCTURAL ABNORMALITIES AND DEVICE THEREFOR

机译:检测染色体结构异常的方法及其装置

摘要

A method and a device for detecting chromosomal structural abnormalities are provided. The method comprises acquiring a whole genome sequencing result of a target individual, that is, multiple pairs of Reads located at two ends of chromosome fragments determined; aligning the sequencing result with a reference sequence, to obtain an abnormal match set, wherein the abnormal match set includes Read pairs that have two Read sequences matched respectively to different chromosomes of the reference sequence; clustering the Read sequences in the abnormal match set based on the positions matched thereto; and filtering the resultant clusters by using, for example, preset requirements associated with compactness and others, and obtaining the filtered result clusters, for determining the occurrence of translocation-type chromosomal structural abnormity.
机译:提供了一种用于检测染色体结构异常的方法和装置。该方法包括获得目标个体的全基因组测序结果,即,确定位于染色体片段两端的多对Reads。将测序结果与参考序列比对,得到异常匹配集,所述异常匹配集包括具有两个分别与参考序列的不同染色体匹配的Read序列的Read对;基于与其匹配的位置,将读取序列聚类到异常匹配集中;通过使用例如与紧凑性等相关的预设要求对结果簇进行过滤,并获得过滤后的结果簇,用于确定易位型染色体结构异常的发生。

著录项

  • 公开/公告号HUE047501T2

    专利类型

  • 公开/公告日2020-04-28

    原文格式PDF

  • 申请/专利权人 BGI GENOMICS CO. LTD.;

    申请/专利号HUE13884613

  • 发明设计人 YANG CHUANCHUN;

    申请日2013-05-15

  • 分类号G16B30;G16B40;

  • 国家 HU

  • 入库时间 2022-08-21 11:17:20

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