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Identification of causative pathogens in eyes with bacterial conjunctivitis by bacterial cell count and microbiota analysis

机译:通过细菌细胞计数和微生物群分析鉴定细菌性结膜炎致病性病原体

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Purpose: To determine the causative pathogens in eyes with bacterial conjunctivitis. Design: Evaluation of diagnostic test or technology. Participants: Thirteen eyes diagnosed clinically with bacterial conjunctivitis and 12 eyes with normal conjunctival sac were studied. Methods: The bacterial cell numbers were counted in the samples stained by ethidium bromide (EtBr). The microbiota was determined by the clone library method using polymerase chain reaction (PCR) amplification of the 16S ribosomal RNA (rRNA) gene with universal primers. In addition, examinations of smears and cultures of samples were performed. Main Outcome Measures: Bacterial cell numbers determined by the EtBr staining method and microbiota analysis based on 16S rRNA gene of samples from eyes with bacterial conjunctivitis. Results: The bacterial cell numbers in the eyes with bacterial conjunctivitis were significantly higher than those in the normal conjunctival sacs. Ten of 13 samples from the eyes with bacterial conjunctivitis had positive PCR results. The remaining 3 samples and all 12 samples from the normal conjunctiva had negative PCR results. In 5 of the 10 PCR-positive samples, the predominant species accounted for 84.5% or more of each clone library. In the remaining 5 samples, the predominant and the second dominant species accounted for 27.4% to 56.3% and 19.0% to 26.8%, respectively, of each clone library. The number of detected species in the clone libraries was between 8 and 20 (average ± standard deviation, 7.5±5.8). Bacteria were detected in 8 of the 10 bacterial conjunctivitis samples and in 5 of the 12 normal samples in the cultures. The number of species detected by cultures was 1 in the eyes with bacterial conjunctivitis and between 1 and 3 (mean ± standard deviation, 1.6±0.9) in the normal conjunctiva. Conclusions: These results showed that the bacterial cell number in a sample is a good method of determining bacterial conjunctivitis. The microbiota analysis detected a diverse group of microbiota in the eyes with bacterial conjunctivitis and showed that the causative pathogens could be determined based on percentages of bacterial species in the clone libraries. The combination of bacterial cell count and microbiota analysis is a good method for identifying the causative pathogens in cases of monomicrobial and polymicrobial conjunctivitis. Financial Disclosure(s): The author(s) have no proprietary or commercial interest in any materials discussed in this article.
机译:目的:确定细菌性结膜炎眼中的病原体。设计:诊断测试或技术的评估。参与者:研究了13眼临床诊断为细菌性结膜炎的眼和12眼具有正常结膜囊的眼。方法:计数经溴乙锭(EtBr)染色的样品中的细菌细胞数。通过克隆文库方法使用通用引物通过16S核糖体RNA(rRNA)基因的聚合酶链反应(PCR)扩增来确定微生物群。另外,进行了涂片检查和样品培养。主要观察指标:细菌性结膜炎双眼样品的16S rRNA基因通过EtBr染色法和菌群分析确定细菌数。结果:细菌性结膜炎眼中的细菌细胞数量明显高于正常结膜囊中的细菌细胞数量。细菌性结膜炎眼睛的13个样本中有10个具有阳性PCR结果。正常结膜的其余3个样品和所有12个样品的PCR结果均为阴性。在10个PCR阳性样本中,有5个占优势,占每个克隆文库的84.5%或更多。在其余的5个样本中,优势和第二优势种分别占每个克隆文库的27.4%至56.3%和19.0%至26.8%。克隆文库中检测到的物种数量在8到20之间(平均值±标准偏差,7.5±5.8)。在培养物中的10个细菌性结膜炎样本中有8个和12个正常样本中有5个检测到细菌。在细菌性结膜炎的眼中,通过培养物检测到的物种数量为1,而在正常结膜中,该物种的数量为1至3(平均值±标准差,1.6±0.9)。结论:这些结果表明样品中细菌细胞数是确定细菌性结膜炎的一种好方法。微生物群分析检测到了细菌性结膜炎眼中的各种微生物群,并表明可以根据克隆文库中细菌种类的百分比确定病原体。细菌细胞计数和微生物群分析的结合是鉴定单微生物和多微生物结膜炎病例中病原体的好方法。财务披露:作者对本文讨论的任何材料均没有所有权或商业利益。

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