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Toehold Switches: De-Novo-Designed Regulators of Gene Expression

机译:脚趾开关:De-Novo设计的基因表达调节剂

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摘要

Efforts to construct synthetic networks in living cells have been hindered by the limited number of regulatory components that provide wide dynamic range and low crosstalk. Here, we report a class of de-novo-designed prokaryotic riboregulators called toehold switches that activate gene expression in response to cognate RNAs with arbitrary sequences. Toehold switches provide a high level of orthogonality and can be forward engineered to provide average dynamic range above 400. We show that switches can be integrated into the genome to regulate endogenous genes and use them as sensors that respond to endogenous RNAs. We exploit the orthogonality of toehold switches to regulate 12 genes independently and to construct a genetic circuit that evaluates 4-input AND logic. Toehold switches, with their wide dynamic range, orthogonality, and programmability, represent a versatile and powerful platform for regulation of translation, offering diverse applications in molecular biology, synthetic biology, and biotechnology.
机译:提供有限的动态范围和低串扰的调节成分数量有限,阻碍了在活细胞中构建合成网络的努力。在这里,我们报告了一类经过重新设计的原核生物调节器,称为脚趾开关,可以响应具有任意序列的同源RNA来激活基因表达。脚趾开关提供了高水平的正交性,并且可以进行正向工程设计以提供400以上的平均动态范围。我们证明了开关可以整合到基因组中以调节内源基因,并将其用作对内源RNA作出反应的传感器。我们利用脚趾开关的正交性来独立调节12个基因,并构建一个评估4输入与逻辑的遗传电路。脚趾开关具有广泛的动态范围,正交性和可编程性,代表了一种多功能且功能强大的翻译调节平台,在分子生物学,合成生物学和生物技术中提供了多种应用。

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