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Mating system and recombination affect molecular evolution in four Triticeae species

机译:交配系统和重组影响四种小麦的分子进化

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Mating systems and recombination are thought to have a deep impact on the organization and evolution of genomes. Because of the decline in effective population size and the interference between linked loci, the efficacy of selection is expected to be reduced in regions with low recombination rates and in the whole genome of self-fertilizing species. At the molecular level, relaxed selection is expected to result in changes in the rate of protein evolution and the pattern of codon bias. It is increasingly recognized that recombination also affects non-selective processes such as the biased gene conversion towards GC alleles (bGC). Like selection, this kind of meiotic drive in favour of GC over AT alleles is expected to be reduced in weakly recombining regions and genomes. Here, we investigated the effect of mating system and recombination on molecular evolution in four Triticeae species: two outcrossers (Secale cereale and Aegilops speltoides) and two selfers (Triticum urartu and Triticum monococcum). We found that GC content, possibly driven by bGC, is affected by mating system and recombination as theoretically predicted. Selection efficacy, however, is only weakly affected by mating system and recombination. We investigated the possible reasons for this discrepancy. A surprising one is that, in outcrossing lineages, selection efficacy could be reduced because of high substitution rates in favour of GC alleles. Outcrossers, but not selfers, would thus suffer from a 'GC-induced' genetic load. This result sheds new light on the evolution of mating systems.
机译:人们认为交配系统和重组对基因组的组织和进化有深远的影响。由于有效种群数量的减少和连锁基因座之间的干扰,在低重组率区域和自体受精物种的整个基因组中,选择的功效有望降低。在分子水平上,宽松的选择有望导致蛋白质进化速率和密码子偏倚模式的改变。人们越来越认识到,重组也影响非选择性过程,例如偏向GC等位基因(bGC)的基因转化。像选择一样,这种在GC上优于AT等位基因的减数分裂驱动有望在弱重组区域和基因组中减少。在这里,我们研究了交配系统和重组对四种小麦属中的分子进化的影响:两个异交(Secale graine和Aegilops speltoides)和两个自交者(Triticum urartu和Triticum monococcum)。我们发现,可能由bGC驱动的GC含量受理论上预测的交配系统和重组的影响。然而,选择效率仅受交配系统和重组的影响很小。我们调查了这种差异的可能原因。令人惊讶的是,在异源谱系中,选择效率可能会降低,因为有利于GC等位基因的替代率很高。因此,异源杂交而不是自交杂交会遭受“ GC诱导”的遗传负荷。这一结果为交配系统的发展提供了新的思路。

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