首页> 外文期刊>Gene: An International Journal Focusing on Gene Cloning and Gene Structure and Function >Pepsin-like aspartic protease (Sc-ASP155) cloning, molecular characterization and gene expression analysis in developmental stages of nematode Steinernema carpocapsae
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Pepsin-like aspartic protease (Sc-ASP155) cloning, molecular characterization and gene expression analysis in developmental stages of nematode Steinernema carpocapsae

机译:线虫Steinernema carpocapsae发育阶段的胃蛋白酶样天冬氨酸蛋白酶(Sc-ASP155)的克隆,分子表征和基因表达分析

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摘要

Steinernema carpocapsae is an insect parasitic nematode associated with the bacterium . Xenorhabdus nematophila. These symbiotic complexes are virulent against the insect host. Many protease genes were shown previously to be induced during parasitism, including one predicted to encode an aspartic protease, which was cloned and analyzed in this study. A cDNA encoding Sc-ASP155 was cloned based on the EST fragment. The full-length cDNA of Sc-ASP155 consists of 955 nucleotides with multiple domains, including a signal peptide (aa1-15), a pro-peptide region (aa16-45), and a typical catalytic aspartic domain (aa71-230). The putative 230 amino acid residues have a calculated molecular mass of 23,812. Da and a theoretical pI of 5.01. Sc-ASP155 blastp analysis showed 40-62% amino acid sequence identity to aspartic proteases from parasitic and free-living nematodes. Expression analysis showed that the sc-asp155 gene was up-regulated during the initial parasitic stage, especially in L3 gut and 6. h induced nematodes. Sequence comparison revealed that Sc-ASP155 was a member of an aspartic protease family and phylogenetic analysis indicated that Sc-ASP155 was clustered with Sc-ASP113. In situ hybridization showed that sc-asp155 was expressed in subventral cells. Additionally, we determined that sc-asp155 is a single-copy gene in . S. carpocapsae. Homology modeling showed that Sc-ASP155 adopts a typical aspartic protease structure. The up-regulated Sc-ASP155 expression revealed that this protease could play a role in the parasitic process. In this study, we have cloned the gene and determined the expression of the pepsin-like aspartic protease Sc-ASP155 in . S. carpocapsae.
机译:Steinernema carpocapsae是一种与细菌有关的昆虫寄生线虫。 Xenorhabdus nematophila。这些共生复合物对昆虫宿主具有毒性。以前显示许多蛋白质基因是在寄生期间诱导的,包括一个预测编码天冬氨酸蛋白酶的基因,在本研究中对其进行了克隆和分析。基于EST片段克隆了编码Sc-ASP155的cDNA。 Sc-ASP155的全长cDNA由955个核苷酸组成,具有多个域,包括信号肽(aa1-15),前肽区(aa16-45)和典型的催化天冬氨酸域(aa71-230)。假定的230个氨基酸残基的计算分子量为23,812。 Da和理论pI为5.01。 Sc-ASP155 blastp分析显示与来自寄生和自由生活线虫的天冬氨酸蛋白酶具有40-62%的氨基酸序列同一性。表达分析表明,sc-asp155基因在最初的寄生虫阶段被上调,尤其是在L3肠道和6 h诱导的线虫中。序列比较显示Sc-ASP155是天冬氨酸蛋白酶家族的成员,并且系统发育分析表明Sc-ASP155与Sc-ASP113聚簇。原位杂交表明sc-asp155在腹膜下细胞中表达。此外,我们确定sc-asp155是的单拷贝基因。 S. carpocapsae。同源性建模表明,Sc-ASP155采用典型的天冬氨酸蛋白酶结构。 Sc-ASP155表达上调表明该蛋白酶可能在寄生过程中起作用。在这项研究中,我们已经克隆了该基因,并确定了胃蛋白酶样天冬氨酸蛋白酶Sc-ASP155的表达。 S. carpocapsae。

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