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首页> 外文期刊>Environmental microbiology >Identification and analysis of four candidate symbiosis genes from 'Chlorochromatium aggregatum', a highly developed bacterial symbiosis
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Identification and analysis of four candidate symbiosis genes from 'Chlorochromatium aggregatum', a highly developed bacterial symbiosis

机译:鉴定和分析来自高度发达的细菌共生的“共生色染色体”的四个候选共生基因

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The consortium 'Chlorochromatium aggregatum' currently represents the most highly developed interspecific association between prokaryotes. It consists of green sulfur bacteria, so-called epibionts, which surround a central, motile, chemotrophic bacterium. Four putative symbiosis genes of the epibiont were recovered by suppression subtractive hybridization and bioinformatics approaches. These genes are transcribed constitutively and do not occur in the free-living relatives of the epibiont. The haemagglutinin-like putative gene products of open reading frames (ORFs) Cag0614 and Cag0616 are unusually large and contain repetitive regions and RGD tripeptides. Cag0616 harbours two beta gamma-crystalline Greek key motifs. Cag1920 codes for a putative haemolysin whereas the gene product of Cag1919 is a putative RTX-like protein. Based on detailed analyses of Cag1919, the C-terminal amino acid sequence comprises six repetitions of the motif GGXGXD predicted to form a Ca2+-binding beta roll. Intact 'C. aggregatum' consortia disaggregated upon the addition of EGTA or pyrophosphate, but stayed intact in the presence of various lectine-binding sugars or proteolytic enzymes. Unlike other RTX toxins, a gene product of Cag1919 could not be detected by Ca-45(2+) autoradiography, indicating a low abundance of the corresponding protein in the cells. The RTX-type C-terminus coded by Cag1919 exhibited a significant similarity to RTX modules of various proteobacterial proteins, suggesting that this putative symbiosis gene has been acquired via horizontal gene transfer from a proteobacterium.
机译:“ Clorochromatium aaggregatum”联盟目前代表了原核生物之间最高度发达的种间关联。它由绿色的硫细菌(所谓的表皮动物)组成,它们围绕着中心的,能动的,化学营养型细菌。通过抑制消减杂交和生物信息学方法回收了表观生物的四个假定的共生基因。这些基因是组成型转录的,不会在表观生物的自由生活亲戚中发生。开放阅读框(ORF)Cag0614和Cag0616的血凝素样推定基因产物异常大,并包含重复区域和RGD三肽。 Cag0616带有两个beta伽马晶体的希腊关键图案。 Cag1920编码假定的溶血素,而Cag1919的基因产物是假定的RTX样蛋白。基于对Cag1919的详细分析,C末端氨基酸序列包含六个重复的GGXGXD基序,预计将形成一个结合Ca2 +的β卷。完整的'C。添加EGTA或焦磷酸盐后,聚集体的集合体分解,但是在各种与凝集素结合的糖或蛋白水解酶存在下保持完整。与其他RTX毒素不同,Ca-45(2+)放射自显影无法检测到Cag1919的基因产物,表明细胞中相应蛋白质的丰度较低。由Cag1919编码的RTX型C末端与各种变形杆菌蛋白的RTX模块具有显着相似性,这表明该推定的共生基因已通过从变形杆菌的水平基因转移获得。

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