Hierarchical conceptual clustering has proven to be a useful, although greatly under-explored data mining technique. A graph-based representation of structural information combined with a substructure discovery technique has been shown to be successful in knowledge discovery. The SUBDUE substructure discovery system provides the advantages of both approaches. This work presents SUBDUE and the development of its clustering functionalities. Several examples are used to illustrate the validity of the approach both in structured and unstructured domains, as well as compare SUBDUE to earlier clustering algorithms. Results show that SUBDUE successfully discovers hierarchical clusterings in both structured and unstructured data.
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