首页> 外文期刊>Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases >Multilocus microsatellite typing (MLMT) reveals genetic homogeneity of Leishmania donovani strains in the Indian subcontinent
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Multilocus microsatellite typing (MLMT) reveals genetic homogeneity of Leishmania donovani strains in the Indian subcontinent

机译:多基因座微卫星分型(MLMT)揭示了印度次大陆利什曼原虫donovani菌株的遗传同质性

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摘要

In this population genetic study of Leishmania donovani parasites in the Indian subcontinent, 132 isolates obtained from patients in Bangladesh, India, Nepal and Sri Lanka suffering from Kala-azar (100), post-Kala-azar dermal leishmaniasis (PKDL) (25) and cutaneous leishmaniasis (CL) (2), and from 5 patients whose clinical patterns were not defined, were analysed by using 15 hyper-variable microsatellite loci. Multilocus microsatellite typing (MLMT) data were analysed by using a Bayesian model-based clustering algorithm and constructing phylogenic tree based on genetic distances. In total, 125 strains from Bangladesh, Bihar (India) and Nepal formed a very homogeneous population regardless of geographical origin, clinical manifestation, and whether they presented in vitro or in vivo susceptibility to antimonial drugs. Identical multilocus microsatellite profiles were found for 108 strains, other strains differed in only one marker. Considerably different microsatellite profiles were identified for three Indian strains most closely related to L. donovani from Kenya, and for four strains from Indian and Sri Lankan CL cases. The circulation of a single homogeneous population of L. donovani in Bihar (India), Bangladesh and Nepal is, most probably, related to the epidemic spread of visceral leishmaniasis in this area.
机译:在这项对印度次大陆利什曼原虫多虫的寄生虫的种群遗传研究中,从孟加拉国,印度,尼泊尔和斯里兰卡的患有黑热病(100),黑热病后皮肤利什曼病(PKDL)的患者中获得了132株分离菌(25)并使用15个高变微卫星基因座分析了5例临床模式未明确的患者中的皮肤利什曼病(CL)(2)。使用基于贝叶斯模型的聚类算法并基于遗传距离构建系统树,对多基因座微卫星分型(MLMT)数据进行了分析。总计,来自孟加拉国,比哈尔(印度)和尼泊尔的125个菌株形成了非常均一的种群,而不论其地理起源,临床表现以及它们是否表现出对锑药物的体外或体内敏感性。对于108个菌株发现了相同的多位点微卫星概况,其他菌株仅在一个标记上有所不同。对于来自肯尼亚的与多诺尼乳杆菌最密切相关的三种印度菌株,以及来自印度和斯里兰卡的CL病例的四种菌株,鉴定出了相当不同的微卫星谱。在比哈尔邦(印度),孟加拉国和尼泊尔,多诺尼乳杆菌的单一同质种群的传播极有可能与该地区内脏利什曼病的流行有关。

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