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Establishment and Validation of RNA-Based Predictive Models for Understanding Survival of Vibrio parahaemolyticus in Oysters Stored at Low Temperatures

机译:基于RNA的预测模型的建立和验证,以了解低温贮藏牡蛎中副溶血性弧菌的存活情况

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This study developed RNA-based predictive models describing the survival of Vibrio parahaemolyticus in Eastern oysters (Crassostrea virginica) during storage at 0, 4, and 10 degrees C. Postharvested oysters were inoculated with a cocktail of five V. parahaemolyticus strains and were then stored at 0, 4, and 10 degrees C for 21 or 11 days. A real- time reverse transcription-PCR (RT-PCR) assay targeting expression of the tlh gene was used to evaluate the number of surviving V. parahaemolyticus cells, which was then used to establish primary molecular models (MMs). Before construction of the MMs, consistent expression levels of the tlh gene at 0, 4, and 10 degrees C were confirmed, and this gene was used to monitor the survival of the total V. parahaemolyticus cells. In addition, the tdh and trh genes were used for monitoring the survival of virulent V. parahaemolyticus. Traditional models (TMs) were built based on data collected using a plate counting method. From the MMs, V. parahaemolyticus populations had decreased 0.493, 0.362, and 0.238 log(10) CFU/g by the end of storage at 0, 4, and 10 degrees C, respectively. Rates of reduction of V. parahaemolyticus shown in the TMs were 2.109, 1.579, and 0.894 log(10) CFU/g for storage at 0, 4, and 10 degrees C, respectively. Bacterial inactivation rates (IRs) estimated with the TMs (-0.245, -0.152, and -0.121 log(10) CFU/day, respectively) were higher than those estimated with the MMs (-0.134,-0.0887, and -0.0732 log(10) CFU/day, respectively) for storage at 0, 4, and 10 degrees C. Higher viable V. parahaemolyticus numbers were predicted using the MMs than using the TMs. On the basis of this study, RNA-based predictive MMs are the more accurate and reliable models and can prevent false-negative results compared to TMs.
机译:本研究开发了基于RNA的预测模型,描述了东部牡蛎(Crassostrea virginica)在0、4和10°C储存期间副溶血性弧菌的存活情况。使用靶向 tlh 基因表达的实时逆转录 PCR (RT-PCR) 测定来评估存活的副溶血性弧菌细胞的数量,然后用于建立初级分子模型 (MM)。在构建MMs之前,确认了tlh基因在0、4和10°C下的一致表达水平,并利用该基因监测副溶血性弧菌细胞总数的存活。此外,tdh和trh基因用于监测毒力副溶血性弧菌的存活情况。传统模型 (TM) 是基于使用平板计数方法收集的数据构建的。在0、4和10°C贮藏结束时,副溶血弧菌种群分别减少了0.493、0.362和0.238 log(10) CFU/g。在0、4和10°C下储存时,TM中显示的副溶血弧菌的减少率分别为2.109、1.579和0.894 log(10) CFU/g。用 TM 估计的细菌灭活率 (IRs) (分别为 -0.245、-0.152 和 -0.121 log(10) CFU/天)高于用 MM 估计的 (-0.134、-0.0887 和 -0.0732 log(10) CFU/天),分别用于在 0、4 和 10 摄氏度下储存。在这项研究的基础上,与TM相比,基于RNA的预测MM是更准确和可靠的模型,可以防止假阴性结果。

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