首页> 外文期刊>Annals of tropical medicine and parasitology >Maximizing the chances of detecting pathogenic leptospires in mammals: the evaluation of field samples and a multi-sample-per-mammal, multi-test approach.
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Maximizing the chances of detecting pathogenic leptospires in mammals: the evaluation of field samples and a multi-sample-per-mammal, multi-test approach.

机译:最大程度地发现哺乳动物中致病性钩端螺旋体的机会:现场样品的评估和每哺乳动物多样品的多重测试方法。

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摘要

Identification of wild animals that harbour the causative leptospires, and the identification of the most important of these 'wild reservoirs' (in terms of threat to human health), are key factors in the epidemiology of human leptospirosis. In an epidemiological investigation in the Australian state of Queensland, in 2007-2008, samples were collected from fruit bats (Pteropus conspicillatus) and rodents (to investigate the potential role of fruit bats in the maintenance and transmission of leptospires to ground-dwelling rodents) and checked for pathogenic leptospires. The results of these studies have now been carefully analysed in attempts to see which method of detection and type of test sample were best. The effects of pentobarbitone sodium used to euthanize wild mammals before collection of necropsy samples, on the survival and detection of leptospires in vitro, were also explored. In the earlier field investigation, serum, renal tissue and urine were collected from wild mammals, for the detection of pathogenic leptospires by culture, the microscopic agglutination test (MAT), real-time PCR and silver impregnation of smears. Although 27.6% of the rodents investigated were found leptospire-positive, culture only yielded four isolates, probably because many cultures were contaminated. The main aims of the present study were to quantify the performance of the individual diagnostic tests and examine the reasons behind the high incidence of culture contamination. The results of sensitivity and specificity analyses for the different diagnostic tests indicated that isolation by culture (the definitive diagnostic test for leptospiral shedding) had perfect (100%) sensitivity when compared with the results of the PCR but a low specificity (40%). The MAT performed poorly, with a sensitivity of 50% when compared against the results of culture. The prevalence of leptospiral carriage revealed by the PCR-based investigation of kidney and urine samples (59.2%) was higher than that revealed using any other method and far higher than the 2.0% revealed by culture. The results of the culture of renal tissue agreed fairly well with those of the PCR-based investigation of such tissue, with a Cohen's unweighted kappa coefficient (kappa) of 0.5 (P = 0.04). The levels of agreement between other pairs of tests were generally poor. The presence of pentobarbitone sodium, at final concentrations of 27.8 or 167 mg/ml, did not affect the viability or the detection of leptospires in culture, and is therefore unlikely to reduce the chances of isolating leptospires from an animal that has been euthanized with the compound. It appears that collecting multiple samples from each mammal being checked will improve the chances of detecting leptospires (and reduce the chances of reporting an inconclusive result for any of the mammals). For the identification of a leptospiral carrier, however, the use of just two detection methods (culture and PCR) and one type of sample (renal tissue) may give adequate sensitivity and specificity. Given the robustness of PCR to contamination and its high sensitivity (it can give a positive result when DNA from just two leptospiral cells is present in the sample), a PCR-based serotyping method, to allow the combined detection and characterisation of leptospires from field isolates, would be extremely useful.
机译:鉴定出具有致病性钩端螺旋体的野生动物,以及鉴定其中最重要的“野生水库”(对人类健康的威胁)是人类钩端螺旋体病流行病学的关键因素。在澳大利亚昆士兰州的一项流行病学调查中,从2007年至2008年,从果蝠(Pteropus conspicillatus)和啮齿动物中收集了样本(以调查果蝠在将钩端螺旋体维持和传播到栖地啮齿动物中的潜在作用)并检查是否有致病的钩藤。现在,已经仔细分析了这些研究的结果,以试图找出哪种检测方法和测试样品的类型最好。还探讨了戊巴比妥钠在尸检样本采集前用于安乐死野生哺乳动物对体外存活和检测钩端螺旋体的影响。在较早的野外调查中,从野生哺乳动物中收集了血清,肾脏组织和尿液,以通过培养,显微镜凝集试验(MAT),实时PCR和涂片银浸渍检测病原性钩端螺旋体。尽管所调查的啮齿动物中有27.6%的钩端螺旋体呈阳性,但培养物中仅产生了4种分离株,可能是因为许多培养物被污染了。本研究的主要目的是量化单个诊断测试的性能,并检查培养物污染高发背后的原因。对于不同诊断测试的敏感性和特异性分析结果表明,与PCR结果相比,通过培养物分离(用于钩端螺旋体脱落的确定性诊断测试)具有完全(100%)的敏感性,但特异性较低(40%)。 MAT的表现较差,与培养结果相比灵敏度为50%。基于PCR的肾脏和尿液样本调查显示,钩端螺旋体携带的患病率(59.2%)高于使用任何其他方法所揭示的水平,远高于培养所显示的2.0%。肾组织的培养结果与基于PCR的此类组织的研究结果非常吻合,科恩的未加权卡伯系数(kappa)为0.5(P = 0.04)。其他几对测试之间的一致性水平通常很差。最终浓度为27.8或167 mg / ml的戊巴比妥钠的存在不会影响培养物中钩端藤的生存力或检测,因此不可能减少从用安​​乐死安乐死的动物中分离出钩端藤的机会。复合。看来,从每个被检查的哺乳动物中收集多个样品将提高检测钩端螺旋体的机会(并减少报告任何哺乳动物不确定结果的机会)。但是,为了鉴定钩端螺旋体载体,仅使用两种检测方法(培养和PCR)和一种样品(肾脏组织)可能会提供足够的灵敏度和特异性。鉴于PCR对污染的鲁棒性和高灵敏度(当样品中仅存在两个钩端螺旋体细胞的DNA时,它可以产生阳性结果),一种基于PCR的血清分型方法,可以结合现场检测和鉴定钩端螺旋体隔离,将非常有用。

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