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OXA-48-Like-Producing Klebsiella pneumoniae in Southern Spain in 2014-2015

机译:2014 - 2015年西班牙南部的牛粪-48类似的Klebsiella肺炎

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The aim of this study was to characterize the population structure of 56 OXA-48-like-producing Klebsiella pneumoniae isolates, as well as extended-spectrum beta-lactamase (ESBL) and carbapenemase genes, recovered in 2014 and 2015 from 16 hospitals in southern Spain. XbaI pulsed-field gel electrophoresis and multilocus sequence typing were performed to assess clonal relatedness. Representative isolates belonging to OXA-48-like-producing and CTX-M-15-coproducing pulsotypes were selected for characterization of bla(OXA-48-like)- and bla(CTX-M-15)-carrying plasmids by PCR-based replicon typing, IncF subtyping, whole-genome sequencing analysis, and typing of Tn1999 structures. Forty-three OXA-48-producing isolates (77%) were recovered from clinical samples and 13 from rectal swabs. All isolates showed ertapenem MIC values of = 1 mg/liter, although 70% remained susceptible to imipenem and meropenem. Forty-nine isolates (88%) produced OXA-48, 5 produced OXA-245, and 2 produced OXA-181. Twenty-eight different pulsotypes (5 detected in more than 1 hospital) and 16 sequence types (STs) were found. The most prevalent clones were ST15 (29 isolates [52%]) and ST11 (7 isolates [13%]). Forty-five (80%) isolates were also bla(CTX-M-15) carriers. The bla(CTX-M-15) gene was mostly (82%) located on IncR plasmids, although ST15 and ST11 isolates also carried this gene on IncF plasmids. The composite transposon variant Tn1999.2-like was the most frequent. Among ST15 and ST11 isolates, different transposon variants were observed. The bla(OXA-48) gene was mainly located on IncL plasmids, although IncM plasmids were also observed. The spread of OXA-48-like-producing K. pneumoniae in southern Spain is mainly due to ST15 and ST11 clones. Variation within clonal lineages could indicate different acquisition events for both ESBL and carbapenemase traits.
机译:该研究的目的是表征56氧氧-48类似的Klebsiella肺炎群分离物的人口结构,以及延伸β-内酰胺酶(ESBL)和碳碱酶基因,于2014年和2015年从南部的16家医院中恢复西班牙。进行Xbai脉冲场凝胶电泳和多层序列键入以评估克隆相关性。选择属于牛粪-48的产生和CTX-M-15-共发电脉冲型的代表性分离型用于通过PCR基于BLA(OXA-48样) - 和BLA(CTX-M-15) - 克鲁西氨酸的表征复制子键入,INCF亚型,全基因组测序分析和TN1999结构的键入。从直肠拭子中从临床样品中回收四十三种牛粪-48的分离物(77%)。所有分离株均显示ERTAPENEM MIC值> = 1毫克/升,虽然70%易于Imipenem和Meropenem。 409分离株(88%)产生的Oxa-48,5产生的Oxa-245和2产生的Oxa-181。发现了二十八种不同的脉冲型(5个以上的医院检测到)和16种序列类型(STS)。最普遍的克隆是ST15(29分离株[52%])和ST11(7分离物[13%])。四十五(80%)分离物也是BLA(CTX-M-15)载体。 BLA(CTX-M-15)基因大多(82%)位于Inc质粒上,尽管ST15和ST11分离物也将该基因进行Incf质粒。复合转座子变体TN1999.2类似的是最常见的。在ST15和ST11分离株中,观察到不同的转座子变体。 BLA(OXA-48)基因主要位于含有质粒上,尽管也观察到INCM质粒。南部西班牙南部肺炎的肺炎肺炎的传播主要是由于ST15和ST11克隆。克隆谱系中的变化可以指示ESBL和碳碱酶活性的不同采集事件。

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