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A New Software Framework for Implementing Crystal Growth Models to Materials of Any Crystallographic Complexity

机译:一种用于实现任何晶体复杂性的材料的晶体增长模型的新软件框架

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摘要

To continue the realization of new therapeutics, a more diverse range of solid forms is being considered. Synthetic modalities are broadening beyond simple organic molecules to more complicated structures, including organic salts, cocrystals, and solvates. As in all crystalline applications, engineering the morphology of such systems remains an important consideration, but traditional in silico approaches require further development to become capable of accurately describing these systems. A necessary, but not sufficient, condition to enact mechanistic crystal growth models is to calculate and organize solid-state interactions between growth units. The typical software framework for acquiring this information is to apply crystallographic symmetry operations to generate a unit cell from the asymmetric unit. While this approach is feasible for systems where the asymmetric unit corresponds to the growth unit itself, many systems do not satisfy this criterion, particularly the emerging therapeutic solid forms. By redesigning the input preparation software framework, we can build a description of the solid-state interactions that is independent of the asymmetric unit and applicable to any crystallographic complexity. We demonstrate the application of this method to three organic molecular crystals with crystallography of varying degrees of complexicty. The studied systems are naphthalene (Z' = 0.5), benzoic acid (Z' = 1), and tazofelone (Z' = 2), respectively (where Z' is the number of molecules in the asymmetric unit). This new software framework lays the groundwork for rapid in silico habit predictions of organic salts, cocrystals, and solvates.
机译:为了继续实现新的治疗方法,正在考虑更多样化的实体形式。合成方式在超出简单的有机分子之外扩大到更复杂的结构,包括有机盐,碳酸酯和溶剂化物。与所有结晶应用一样,工程仍然是一个重要的考虑形态,但在Silico方法中的传统需要进一步发展能够准确地描述这些系统。制定机械晶体生长模型的必要,但不足,条件是计算和组织生长单元之间的固态相互作用。用于获取此信息的典型软件框架是应用晶体对称操作以生成来自非对称单元的单位单元。虽然这种方法对于非对称单元对应于生长单元本身的系统是可行的,但是许多系统不满足该标准,特别是新出现的治疗性固体形式。通过重新设计输入准备软件框架,我们可以构建独立于非对称单元的固态相互作用的描述,并且适用于任何晶体复杂性。我们证明了这种方法在三种有机分子晶体中的应用,具有不同程度的复杂性的结晶学。研究的系统是萘(Z'= 0.5),苯甲酸(Z'= 1)和Tazofelone(Z'= 2)(其中Z'是不对称单元中的分子数)。这种新的软件框架为有机盐,池组和溶剂化物的硅习惯预测奠定了迅速的基础。

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  • 来源
    《Crystal growth & design》 |2020年第5期|共8页
  • 作者单位

    Univ Calif Santa Barbara Dept Chem Engn Santa Barbara CA 93106 USA;

    Univ Calif Santa Barbara Dept Chem Engn Santa Barbara CA 93106 USA;

    Univ Calif Santa Barbara Dept Elect &

    Comp Engn Santa Barbara CA 93106 USA;

    Univ Calif Santa Barbara Dept Chem Engn Santa Barbara CA 93106 USA;

    Shanghai Jiao Tong Univ Natl Key Lab Sci &

    Technol Micro Nano Fabricat Dept Micro Nano Elect Shanghai 200240 Peoples R China;

    Univ Calif Santa Barbara Dept Chem Engn Santa Barbara CA 93106 USA;

    Univ Calif Santa Barbara Dept Chem Engn Santa Barbara CA 93106 USA;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 晶体学;
  • 关键词

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