首页> 外文期刊>Ticks and tick-borne diseases >Comparison of heat shock protein 70 kDa and 18S rDNA genes for molecular detection and phylogenetic analysis of Babesia vogeli from whole blood of naturally infected dogs
【24h】

Comparison of heat shock protein 70 kDa and 18S rDNA genes for molecular detection and phylogenetic analysis of Babesia vogeli from whole blood of naturally infected dogs

机译:热休克蛋白70kDA和18S rDNA基因的比较来自天然感染犬全血Babesia Vogeli的分子检测和系统发育分析

获取原文
获取原文并翻译 | 示例
           

摘要

A total of 300 blood samples of domiciliated dogs in rural and urban areas of southeast Rio de Janeiro State, Brazil, were used to compare the 18S ribosomal DNA region (18S rDNA) and the heat shock protein 70 kDa (hsp70) gene for molecular detection of Babesia vogeli and to perform a phylogenetic study comparing the two genes for B. vogeli classification. Using conventional polymerase chain reaction (cPCR) of 18S rDNA and hsp70 sequences, we were able to detect B. vogeli with the same sensitivity (96.15%) and specificity (99.63%). However, sequencing revealed one false positive (Rangelia sp.) for 18S rDNA that was not detected by hsp70. This is the first report of an organism closely related to the Rangelia vitalii parasite of dogs in Brazil. In the hsp70-cPCR and hsp70-qPCR comparison, 15.66% of samples were considered positive by quantitative (q) PCR, significantly more than was detected by cPCR (8.66%). In addition to the high conservation of the 18S rDNA, phylogenetic analysis showed that the hsp70 gene can be used to describe phylogenetic relationships between canine piroplasmids with more accuracy than 18S rDNA. According to these findings, the qPCR method has greater sensitivity than cPCR for detection of B. vogeli in naturally infected dogs. The hsp70-qPCR detection limit was 10 copies, with an efficiency of 100.30% and a determination coefficient (R-2) of 0.998. The development of this qPCR method provides a highly sensitive approach for B. vogeli molecular detection and a tool that is capable of quantifying parasitemia levels in whole blood samples from dogs. The primers and probes were designed to be specific for B. vogeli, though analytical specificity of the assay has not been tested in vitro with DNA of certain Babesia species that infect dogs. The hsp70 gene is a precise molecular marker for Babesia phylogeny, especially species that infect dogs.
机译:在巴西东南部的Rio de Janeiro State的农村和城市地区共有300种血液样本,用于比较18S核糖体DNA区域(18S rDNA)和用于分子检测的热休克蛋白70kDA(HSP70)基因Babesia Vogeli并进行系统发育研究比较B.Vogeli分类的两个基因。使用常规的聚合酶链反应(CPCR)为18S RDNA和HSP70序列,我们能够检测具有相同灵敏度(96.15%)和特异性(99.63%)的B.Vogeli。然而,测序揭示了18S rDNA的假阳性(Rangelia sp.),其未被Hsp70检测到的18秒。这是与巴西的狗的Rangelia Vitalii寄生虫密切相关的生物体的第一报告。在HSP70-CPCR和HSP70-QPCR比较中,通过定量(Q)PCR被认为是阳性的15.66%,显着超过CPCR检测(8.66%)。除了18S rDNA的高保留外,系统发育分析表明,HSP70基因可用于描述犬粒子瘤之间的系统发育关系,比18s rdNA更精确。根据这些发现,QPCR方法比CPCR的敏感性更大,用于检测天然感染的犬的B. Vogeli。 HSP70-QPCR检测限为10份,效率为100.30%,测定系数(R-2)为0.998。这种QPCR方法的发展为B.Vogeli分子检测和能够量化来自狗的全血样品中的寄生虫水平的工具提供了高敏感的方法。底漆和探针设计为特异于B.Vogeli,但在体外尚未通过感染狗的某些Babesia物种的DNA进行分析特异性。 HSP70基因是Babesia Phylogy的精确分子标记,特别是感染狗的物种。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号