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首页> 外文期刊>Nature medicine >Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks
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Near real-time intraoperative brain tumor diagnosis using stimulated Raman histology and deep neural networks

机译:使用刺激拉曼组织学和深神经网络近实时术中脑肿瘤诊断

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Intraoperative diagnosis is essential for providing safe and effective care during cancer surgery(1). The existing workflow for intraoperative diagnosis based on hematoxylin and eosin staining of processed tissue is time, resource and labor intensive(2,3). Moreover, interpretation of intraoperative histologic images is dependent on a contracting, unevenly distributed, pathology workforce(4). In the present study, we report a parallel workflow that combines stimulated Raman histology (SRH)(5-7), a label-free optical imaging method and deep convolutional neural networks (CNNs) to predict diagnosis at the bedside in near real-time in an automated fashion. Specifically, our CNNs, trained on over 2.5 million SRH images, predict brain tumor diagnosis in the operating room in under 150 s, an order of magnitude faster than conventional techniques (for example, 20-30 min)(2). In a multicenter, prospective clinical trial (n = 278), we demonstrated that CNN-based diagnosis of SRH images was noninferior to pathologist-based interpretation of conventional histologic images (overall accuracy, 94.6% versus 93.9%). Our CNNs learned a hierarchy of recognizable histologic feature representations to classify the major histopathologic classes of brain tumors. In addition, we implemented a semantic segmentation method to identify tumor-infiltrated diagnostic regions within SRH images. These results demonstrate how intraoperative cancer diagnosis can be streamlined, creating a complementary pathway for tissue diagnosis that is independent of a traditional pathology laboratory.
机译:术中诊断对于在癌症外科(1)期间提供安全和有效的护理至关重要。基于苏木精和加工组织的曙红染色的术中诊断的现有工作流程是时间,资源和劳动密集(2,3)。此外,对术中组织学图像的解释取决于收缩,不均匀分布,病理劳动力(4)。在本研究中,我们报告了一个并行工作流程,该流程将刺激的拉曼组织学(SRH)(5-7)(5-7),一种无标签的光学成像方法和深卷积神经网络(CNNS)结合,以预测近期实时床边的诊断以自动的方式。具体而言,我们的CNNS培训超过250万SRH图像,预测在​​150秒下的手术室中的脑肿瘤诊断,比常规技术更快(例如,20-30分钟)(2)。在多中心,前瞻性临床试验(N = 278)中,我们证明了基于CNN的SRH图像的诊断是非基于病理学家的常规组织学图像的解释(总体准确性,94.6%与93.9%)。我们的CNN学习了可识别的组织学特征表示的层次结构,以分类脑肿瘤的主要组织病理学类。此外,我们实施了一种语义分段方法,以鉴定SRH图像内的肿瘤渗透诊断区域。这些结果表明了如何流化术中癌症诊断,从而为组织诊断产生互补途径,这些途径与传统的病理实验室无关。

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