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REFUGE Challenge: A unified framework for evaluating automated methods for glaucoma assessment from fundus photographs

机译:避难所挑战:从眼底照片评估青光眼评估的自动化方法的统一框架

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摘要

Glaucoma is one of the leading causes of irreversible but preventable blindness in working age populations. Color fundus photography (CFP) is the most cost-effective imaging modality to screen for retinal disorders. However, its application to glaucoma has been limited to the computation of a few related biomarkers such as the vertical cup-to-disc ratio. Deep learning approaches, although widely applied for medical image analysis, have not been extensively used for glaucoma assessment due to the limited size of the available data sets. Furthermore, the lack of a standardize benchmark strategy makes difficult to compare existing methods in a uniform way. In order to overcome these issues we set up the Retinal Fundus Glaucoma Challenge, REFUGE (https://refuge.grand-challenge.org), held in conjunction with MIC-CAI 2018. The challenge consisted of two primary tasks, namely optic disc/cup segmentation and glaucoma classification. As part of REFUGE, we have publicly released a data set of 1200 fundus images with ground truth segmentations and clinical glaucoma labels, currently the largest existing one. We have also built an evaluation framework to ease and ensure fairness in the comparison of different models, encouraging the development of novel techniques in the field. 12 teams qualified and participated in the online challenge. This paper summarizes their methods and analyzes their corresponding results. In particular, we observed that two of the top-ranked teams outperformed two human experts in the glaucoma classification task. Furthermore, the segmentation results were in general consistent with the ground truth annotations, with complementary outcomes that can be further exploited by ensembling the results. (C) 2019 Elsevier B.V. All rights reserved.
机译:青光眼是不可逆转但可预防工作年龄群体的不可逆转的原因之一。彩色眼底摄影(CFP)是筛选视网膜障碍的最具成本效益的成像模型。然而,其对青光眼的应用仅限于计算少数相关生物标志物,例如垂直杯盘比。虽然广泛应用于医学图像分析,但由于可用数据集的大小有限,但深度学习方法尚未广泛用于青光眼评估。此外,缺乏标准化的基准策略使得难以以统一的方式比较现有方法。为了克服这些问题,我们建立了与麦克风CAI 2018结合的视网膜眼底青光眼挑战,避难所(https://refuge.grand -challenge.org)。挑战包括两个主要任务,即光盘/杯分割和青光眼分类。作为避难所的一部分,我们公开发布了一个带有地面真实细分和临床青光眼标签的1200个眼底图像的数据集,目前是现有最大的。我们还建立了一个评估框架,以便于在不同模型的比较中放松和确保公平,鼓励开发领域的新颖技术。 12个团队合格并参加了在线挑战。本文总结了它们的方法并分析了它们的相应结果。特别是,我们观察到,两个排名前的团队中的两个人在青光眼分类任务中表现出两位人类专家。此外,分割结果一般与地面真理注释一致,互补结果可以通过集合结果进一步利用。 (c)2019年Elsevier B.V.保留所有权利。

著录项

  • 来源
    《Medical image analysis》 |2020年第2020期|共21页
  • 作者单位

    Med Univ Vienna Dept Ophthalmol &

    Optometry VRC Christian Doppler Lab Ophthalm Image Anal OPTIMA;

    Incept Inst Artificial Intelligence Abu Dhabi U Arab Emirates;

    Univ Porto Fac Medicine Ophthalmol Unit Surg &

    Physiol Dept Porto Portugal;

    Katholieke Univ Leuven Res Grp Ophthalmol Leuven Belgium;

    Indian Inst Technol IIT Ropar Dept Comp Sci &

    Engn Rupnagar 140001 Punjab India;

    Univ Politecn Valencia I3B E-46022 Valencia Spain;

    Univ Florida J Crayton Pruitt Family Dept Biomed Engn Gainesville FL 32611 USA;

    Chinese Univ Hong Kong Dept Comp Sci &

    Engn Hong Kong 999077 Peoples R China;

    Gachon Univ Seongnam Si 461701 Gyeonggi Do South Korea;

    Samsung SDS AI Res Ctr Seoul 06765 South Korea;

    Samsung SDS AI Res Ctr Seoul 06765 South Korea;

    Yale Univ New Haven CT 06510 USA;

    Univ Florida J Crayton Pruitt Family Dept Biomed Engn Gainesville FL 32611 USA;

    Beijing Univ Chem Technol Fac Sci Beijing 100029 Peoples R China;

    IIT Madras Healthcare Technol Innovat Ctr Chennai Tamil Nadu India;

    Univ Politecn Valencia I3B E-46022 Valencia Spain;

    Indian Inst Technol IIT Ropar Dept Comp Sci &

    Engn Rupnagar 140001 Punjab India;

    IIT Madras Dept Elect Engn Chennai Tamil Nadu India;

    Indian Inst Technol IIT Ropar Dept Comp Sci &

    Engn Rupnagar 140001 Punjab India;

    VUNO Inc Seoul 137810 South Korea;

    Australian Inst Machine Learning Adelaide SA Australia;

    Chinese Univ Hong Kong Dept Comp Sci &

    Engn Hong Kong 999077 Peoples R China;

    Cleerly Inc New York NY 10022 USA;

    Australian Inst Machine Learning Adelaide SA Australia;

    South China Univ Technol Guangzhou 510006 Guangdong Peoples R China;

    Beijing Univ Chem Technol Fac Sci Beijing 100029 Peoples R China;

    South China Univ Technol Guangzhou 510006 Guangdong Peoples R China;

    Sun Yat Sen Univ Zhongshan Ophthalm Ctr Guangzhou Guangdong Peoples R China;

    Sun Yat Sen Univ Zhongshan Ophthalm Ctr Guangzhou Guangdong Peoples R China;

    Baidu Inc Artificial Intelligence Innovat Business Beijing Peoples R China;

    Med Univ Vienna Dept Ophthalmol &

    Optometry VRC Christian Doppler Lab Ophthalm Image Anal OPTIMA;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 影像诊断学;
  • 关键词

    Glaucoma; Fundus photography; Deep learning; Image segmentation; Image classification;

    机译:青光眼;眼底摄影;深入学习;图像分割;图像分类;

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