首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >Hydration Shell of Antifreeze Proteins: Unveiling the Role of Non-Ice-Binding Surfaces
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Hydration Shell of Antifreeze Proteins: Unveiling the Role of Non-Ice-Binding Surfaces

机译:防冻蛋白的水合壳:揭示非冰结合表面的作用

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摘要

Antifreeze proteins (AFPs) have the ability to inhibit ice growth by binding to ice nuclei. Their ice-binding mechanism is still unclear, yet the hydration layer is thought to play a fundamental role. Here, we use molecular dynamics simulations to characterize the hydration shell of two AFPs and two non-AFPs. The calculated shell thickness and density of the AFPs do not feature any relevant difference with respect to the non-AFPs. Moreover, the hydration shell density is always higher than the bulk density and, thus, no low-density, ice-like layer is detected at the ice-binding surface (IBS) of AFPs. Instead, we observe local water-density differences in AFPs between the IBS (lower density) and the non-IBS (higher density). The lower solvent density at the ice-binding site can pave the way to the protein binding to ice nuclei, while the higher solvent density at the non-ice-binding surfaces might provide protection against ice growth.
机译:防冻蛋白(AFP)通过与冰核结合而抑制冰生长。 它们的冰结合机制尚不清楚,然而,据认为,水合层起到基本作用。 在这里,我们使用分子动力学模拟来表征两个AFP和两个非AFP的水合壳。 计算出的AFP的壳厚度和密度不具有与非AFP的任何相关差异。 此外,水合壳体密度总是高于堆积密度,因此在AFP的冰结合表面(IBS)处没有检测到低密度,冰状层。 相反,我们观察IBS(较低密度)和非IBS(更高密度)之间的局部水密度差异。 冰结合位点的较低溶剂密度可以铺平到与冰核的结合蛋白质的方式,而非冰结合表面的较高溶剂密度可以提供防止冰的生长。

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