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Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins

机译:水合焓和熵之间的平衡对于防冻蛋白中的冰结合表面很重要

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摘要

Antifreeze Proteins (AFPs) inhibit the growth of an ice crystal by binding to it. The detailed binding mechanism is, however, still not fully understood. We investigated three AFPs using Molecular Dynamics simulations in combination with Grid Inhomogeneous Solvation Theory, exploring their hydration thermodynamics. The observed enthalpic and entropic differences between the ice-binding sites and the inactive surface reveal key properties essential for proteins in order to bind ice: While entropic contributions are similar for all sites, the enthalpic gain for all ice-binding sites is lower than for the rest of the protein surface. In contrast to most of the recently published studies, our analyses show that enthalpic interactions are as important as an ice-like pre-ordering. Based on these observations, we propose a new, thermodynamically more refined mechanism of the ice recognition process showing that the appropriate balance between entropy and enthalpy facilitates ice-binding of proteins. Especially, high enthalpic interactions between the protein surface and water can hinder the ice-binding activity.
机译:防冻蛋白(AFP)通过与冰晶结合来抑制冰晶的生长。但是,仍然没有完全了解详细的绑定机制。我们使用分子动力学模拟结合网格非均匀溶剂化理论研究了三种AFP,探讨了它们的水合热力学。观察到的冰结合位点和非活性表面之间的焓和熵差异揭示了蛋白质结合冰必不可少的关键特性:尽管所有位点的熵贡献相似,但所有冰结合位点的焓增加均低于其余的蛋白质表面。与最近发表的大多数研究相反,我们的分析表明,焓相互作用与像冰一样的预定过程一样重要。基于这些观察结果,我们提出了一种新的,热力学上更精细的冰识别过程机制,该机制表明,熵和焓之间的适当平衡有助于蛋白质的冰结合。特别是,蛋白质表面和水之间的高焓相互作用会阻碍冰的结合活性。

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