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Nested-PCR and TaqMan real-time quantitative PCR assays for human adenoviruses in environmental waters

机译:巢式PCR和TaqMan实时定量PCR测定法用于环境水中的人腺病毒

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Human adenovirus (HAdV) infections can occur throughout the year. Cases of HAdV-associated respiratory disease have been more common in the late winter, spring, and early summer. In this study, to provide viral pollution data for further epidemiological studies and governmental actions, the presence of HAdV in the aquatic environment was quantitatively surveyed in the summer. This study was conducted to compare the efficiencies of nested-PCR (polymerase chain reaction) and qPCR (quantitative PCR) for detecting HAdV in environmental waters. A total of 73 water samples were collected from Puzi River in Taiwan and subjected to virus concentration methods. In the results, qPCR had much better efficiency for specifying the pathogen in river sample. HAdV41 was detected most frequently in the river water sample (10.9%). The estimated HAdV concentrations ranged between 6.75 x 10(2) and 2.04 x 10(9) genome copies/L. Significant difference was also found in heterotrophic plate counts, conductivity, water temperature, and water turbidity between presence/ absence of HAdV. HAdV in the Puzi River may pose a significant health risk.
机译:全年可能发生人类腺病毒(HAdV)感染。与HAdV相关的呼吸系统疾病病例在冬季末,春季和初夏更为常见。在这项研究中,为了为进一步的流行病学研究和政府行动提供病毒污染数据,夏季对水环境中HAdV的存在进行了定量调查。进行这项研究以比较巢式PCR(聚合酶链反应)和qPCR(定量PCR)检测环境水中HAdV的效率。从台湾Pu子河收集了总共73个水样,并进行了病毒浓缩方法。结果表明,qPCR可以更好地确定河流样品中的病原体。在河水样品中检测到HAdV41的频率最高(10.9%)。估计的HAdV浓度在6.75 x 10(2)和2.04 x 10(9)基因组拷贝/ L之间。在存在/不存在HAdV之间,异养菌平板数,电导率,水温和水浊度也存在显着差异。浦子河的HAdV可能会构成重大的健康风险。

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