首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >Determinations of ~(15)N Chemical Shift Anisotropy Magnitudes in a Uniformly ~(15)N,~(13)C-Labeled Microcrystalline Protein by Three-Dimensional Magic-Angle Spinning Nuclear Magnetic Resonance Spectroscopy
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Determinations of ~(15)N Chemical Shift Anisotropy Magnitudes in a Uniformly ~(15)N,~(13)C-Labeled Microcrystalline Protein by Three-Dimensional Magic-Angle Spinning Nuclear Magnetic Resonance Spectroscopy

机译:三维魔角旋转核磁共振波谱法测定均匀〜(15)N,〜(13)C标记的微晶蛋白中〜(15)N化学位移各向异性幅度

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Amide ~(15)N chemical shift anisotropy (CSA) tensors provide quantitative insight into protein structure and dynamics.Experimental determinations of ~(15)N CSA tensors in biologically relevant molecules have typically been performed by NMR relaxation studies in solution,goniometric analysis of single-crystal spectra,or slow magic-angle spinning (MAS) NMR experiments of microcrystalline samples.Here we present measurements of ~(15)N CSA tensor magnitudes in a protein of known structure by three-dimensional MAS solid-state NMR.Isotropic ~(15)N,~(13)C alpha,and ~(13)C' chemical shifts in two dimensions resolve site-specific backbone amide recoupled CSA line shapes in the third dimension.Application of the experiments to the 56-residue beta1 immunoglobulin binding domain of protein G (GB1) enabled 91 independent determinations of ~(15)N tensors at 51 of the 55 backbone amide sites,for which ~(15)N- ~(13)C alpha and/or ~(15)N-~(13)C' cross-peaks were resolved in the two-dimensional experiment.For 37 ~(15)N signals,both intra- and interresidue correlations were resolved,enabling direct comparison of two experimental data sets to enhance measurement precision.Systematic variations between beta-sheet and alpha-helix residues are observed;the average value for the anisotropy parameter,delta (delta=delta_(zz)-delta_(iso)),for alpha-helical residues is 6 ppm greater than that for the beta-sheet residues.The results show a variation in delta of ~(15)N amide backbone sites between -77 and -115 ppm,with an average value of -103.5 ppm.Some sites (e.g.,G41) display smaller anisotropy due to backbone dynamics.In contrast,we observe an unusually large ~(15)N tensor for K50,a residue that has an atypical,positive value for the backbone phi torsion angle.To our knowledge,this is the most complete experimental analysis of ~(15)N CSA magnitude to date in a solid protein.The availability of previous high-resolution crystal and solution NMR structures,as well as detailed solid-state NMR studies,will enhance the value of these measurements as a benchmark for the development of ab initio calculations of amide ~(15)N shielding tensor magnitudes.
机译:酰胺〜(15)N化学位移各向异性(CSA)张量提供了对蛋白质结构和动力学的定量洞察力。通常通过NMR弛豫研究在溶液中进行的测定生物学相关分子中〜(15)N CSA张量的实验测定,比色法进行单晶光谱或微晶样品的慢幻角旋转(MAS)NMR实验。在这里,我们通过三维MAS固态NMR测量已知结构的蛋白质中〜(15)N CSA张量的大小。 〜(15)N,〜(13)C alpha和〜(13)C'在二维中的化学位移解决了三维中位点特异性骨架酰胺重新偶联的CSA线形的问题。该实验在56个残基的beta1中的应用蛋白G(GB1)的免疫球蛋白结合结构域可在55个主酰胺位中的51个位点中的51个位点独立确定〜(15)N张量,其中〜(15)N-〜(13)C alpha和/或〜(15) N-〜(13)C'交叉峰在二维实验中得到解析nt。对于37〜(15)N信号,解析了残基内和残基之间的相关性,可以直接比较两个实验数据集以提高测量精度。观察到β-sheet和α-螺旋残基之间的系统差异;取平均值对于各向异性参数delta(delta = delta_(zz)-delta_(iso)),α-螺旋残基的残基比β-sheet残基的残基大6 ppm。结果表明,δ的变化约为(15) N酰胺主链位点在-77至-115 ppm之间,平均值为-103.5 ppm。某些位点(例如G41)由于主链动力学而表现出较小的各向异性。相反,我们观察到异常大的〜(15)N张量K50的残基,对骨架φ扭转角具有非典型的正值。据我们所知,这是迄今为止在固体蛋白中〜(15)N CSA量级的最完整的实验分析。分辨的晶体和溶液核磁共振结构,以及详细的固态核磁共振谱最后,将提高这些测量的价值,作为开发酰胺〜(15)N屏蔽张量幅度的从头算的基准。

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