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首页> 外文期刊>The journal of physical chemistry, A. Molecules, spectroscopy, kinetics, environment, & general theory >Calculating geochemical reaction pathways - Exploration of the inner-sphere water exchange mechanism in Al(H2O)(6)(3+)(aq)+nH(2)O with ab initio calculations and molecular dynamics
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Calculating geochemical reaction pathways - Exploration of the inner-sphere water exchange mechanism in Al(H2O)(6)(3+)(aq)+nH(2)O with ab initio calculations and molecular dynamics

机译:计算地球化学反应路径-Al(H2O)(6)(3 +)(aq)+ nH(2)O的内层水交换机理的从头算和分子动力学研究

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We have simulated exchange of inner-sphere and bulk water molecules for different sizes of Al3+(aq) clusters, Al(H2O)(6)(3+) + nH(2)O for n = 0, 1, 6, or 12, with ab initio and molecular dynamics simulations, in order to understand how robust the ab initio method is for identifying hydrolytic reaction pathways of particular importance to geochemistry. In contrast to many interfacial reactions, this particular elementary reaction is particularly simple and well-constrained by experiment. Nevertheless, we find that a rich array of parallel reaction pathways depend sensitively on the details of the solvation sphere and structure and that larger clusters are not necessarily better. Inner-sphere water exchange in Al3+(aq) may occur through two Langford-Gray dissociative pathways, one in which the incoming and outgoing waters are cis, the other in which they are,trans to one another. A large majority of exchanges in the molecular dynamics simulations occurred via the trans mechanism, in contrast to the predictions of the ab initio method. In Al(H2O)(6)(3+) + H2O, the cis mechanism has a transition state of 84.3 kJ/mol, which is in good agreement with previous experimental and ab initio results, while the trans mechanism has only a saddle point with two negative frequencies, not a transition state, at 89.7 kJ/mol. In addition to the exchange mechanisms, dissociation pathways could be identified that were considerably lower in energy than experiment and varied considerably between 60 and 100 kJ/mol, depending on the particular geometry and cluster size, with no clear relation between the two. Ab initio calculations using large clusters with full second coordination spheres (n = 12) were unable to find dissociation or exchange transition states because the network of hydrogen bonds in the second coordination sphere was too rigid to accommodate the outgoing inner-sphere water. Our results indicate that caution should surround ab initio simulation of complicated dynamic processes such as hydrolysis, ion exchange, and interfacial reactions that involve several steps. Dynamic methods of simulation need to accompany static methods such as ab initio calculation, and it is best to consider simulated pathways as hypotheses to be tested experimentally rather than definitive properties of the reaction.
机译:我们已经模拟了不同大小的Al3 +(aq)团簇,Al(H2O)(6)(3+)+ nH(2)O对于n = 0、1、6或12的内球和大块水分子的交换,从头算和分子动力学模拟,以了解从头算方法对于识别对地球化学特别重要的水解反应途径的鲁棒性。与许多界面反应相反,这种特定的元素反应特别简单,并且受到实验的限制。然而,我们发现大量平行反应途径敏感地取决于溶剂化球和结构的细节,并且较大的簇不一定更好。 Al3 +(aq)中的内层水交换可能通过两种Langford-Gray解离途径发生,一种途径是进水和出水都是顺式,另一种是相互转化。与从头算方法的预测相反,分子动力学模拟中的大多数交换都是通过反式机制进行的。在Al(H2O)(6)(3+)+ H2O中,顺式机理的过渡态为84.3 kJ / mol,与先前的实验和从头算的结果非常吻合,而反式机理只有一个鞍点具有两个负频率(不是过渡状态),为89.7 kJ / mol。除交换机制外,可以确定解离途径,其能量比实验低得多,并且在60至100 kJ / mol之间变化很大,这取决于特定的几何形状和团簇大小,两者之间没有明确的关系。使用具有完整的第二配位球(n = 12)的大型簇的从头算计算无法找到解离或交换过渡态,因为第二配位球中的氢键网络太刚性而无法容纳流出的内层水。我们的结果表明,谨慎应对复杂的动态过程进行从头模拟,例如水解,离子交换和涉及多个步骤的界面反应。动态模拟方法需要伴随着从头计算等静态方法,并且最好将模拟路径视为要通过实验测试的假设,而不是反应的确定性质。

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