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首页> 外文期刊>The Journal of Chemical Physics >Chemically transferable coarse-grained potentials from conditional reversible work calculations
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Chemically transferable coarse-grained potentials from conditional reversible work calculations

机译:从条件可逆功计算中可化学转移的粗粒度电势

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The representability and transferability of effective pair potentials used in multiscale simulations of soft matter systems is ill understood. In this paper, we study liquid state systems composed of n-alkanes, the coarse-grained (CG) potential of which may be assumed pairwise additive and has been obtained using the conditional reversible work (CRW) method. The CRW method is a free-energy-based coarse-graining procedure, which, by means of performing the coarse graining at pair level, rigorously provides a pair potential that describes the interaction free energy between two mapped atom groups (beads) embedded in their respective chemical environments. The pairwise nature of the interactions combined with their dependence on the chemically bonded environment makes CRW potentials ideally suited in studies of chemical transferability. We report CRW potentials for hexane using a mapping scheme that merges two heavy atoms in one CG bead. It is shown that the model is chemically and thermodynamically transferable to alkanes of different chain lengths in the liquid phase at temperatures between the melting and the boiling point under atmospheric (1 atm) pressure conditions. It is further shown that CRW-CG potentials may be readily obtained from a single simulation of the liquid state using the free energy perturbation method, thereby providing a fast and versatile molecular coarse graining method for aliphatic molecules.
机译:人们对在软物质系统的多尺度模拟中使用的有效对势的可表示性和可传递性还不甚了解。在本文中,我们研究了由正构烷烃组成的液态体系,其粗粒(CG)势可假定为成对加成,并已使用条件可逆功(CRW)方法获得。 CRW方法是一种基于自由能的粗粒度过程,该过程通过在成对水平上执行粗粒化,严格提供了一个成对电势,该对电势描述了嵌入其原子中的两个映射原子组(珠)之间的相互作用自由能各自的化学环境。相互作用的成对性质以及对化学键合环境的依赖性使得CRW电位非常适合研究化学转移性。我们使用一种在一个CG珠中合并两个重原子的映射方案报告了己烷的CRW势。结果表明,该模型可在大气压(1 atm)压力条件下,在熔点和沸点之间的温度下,化学和热力学转化为液相中链长不同的烷烃。进一步表明,使用自由能微扰法可以很容易地通过对液态的单次模拟来获得CRW-CG电位,从而为脂肪族分子提供了一种快速而通用的分子粗粒化方法。

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