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Total variation regularization for 3D reconstruction in fluorescence tomography: experimental phantom studies

机译:荧光层析成像中3D重建的总变化正则化:实验体模研究

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摘要

Fluorescence tomography (FT) is depth-resolved three-dimensional (3D) localization and quantification of fluorescence distribution in biological tissue and entails a highly ill-conditioned problem as depth information must be extracted from boundary measurements. Conventionally, L_2 regularization schemes that penalize the Euclidean norm of the solution and possess smoothing effects are used for FT reconstruction. Oversmooth, continuous reconstructions lack high-frequency edge-type features of the original distribution and yield poor resolution. We propose an alternative regularization method for FT that penalizes the total variation (TV) norm of the solution to preserve sharp transitions in the reconstructed fluorescence map while overcoming ill-posedness. We have developed two iterative methods for fast 3D reconstruction in FT based on TV regularization inspired by Rudin-Osher-Fatemi and split Bregman algorithms. The performance of the proposed method is studied in a phantom-based experiment using a noncontact constant-wave trans-illumination FT system. It is observed that the proposed method performs better in resolving fluorescence inclusions at different depths.
机译:荧光层析成像(FT)是深度分辨的三维(3D)定位和生物组织中荧光分布的量化,并且由于必须从边界测量中提取深度信息,因此存在病情严重的问题。常规地,将惩罚解决方案的欧几里得范数并具有平滑效果的L_2正则化方案用于FT重建。过度平滑,连续的重建缺少原始分布的高频边缘类型特征,并且产生较差的分辨率。我们提出了另一种针对FT的正则化方法,该方法会对解决方案的总变异(TV)范数进行惩罚,以在克服不适定性的同时保留重构荧光图中的急剧转变。在Rudin-Osher-Fatemi和拆分Bregman算法的启发下,我们基于电视正则化开发了两种用于FT中快速3D重建的迭代方法。使用非接触式恒定波透射照明FT系统在基于幻像的实验中研究了该方法的性能。观察到,所提出的方法在分辨不同深度的荧光夹杂物方面表现更好。

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