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Capturing Plant Metabolome with Direct-Immersion in Vivo Solid Phase Microextraction of Plant Tissues

机译:体内固相微萃取法直接浸入捕获植物代谢组。

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For the first time, an in vivo sampling mode of direct immersion-solid phase microextraction (DI-SPME) was employed to capture the metabolome of living plant specimens, using apple (Malus x domestica Borkh.) as a model system. Metabolites were extracted from apple tissues and introduced by thermal desorption into a comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry instrument. The feasibility of this sampling approach, based on exploitation of microextraction principles, including negligible depletion of free analyte concentrations, solventless sampling and sample preparation, and on-site compatibility, was determined in global metabolite analysis. Rather than adopting an approach of traditional sample preparation, requiring metabolism quenching and laborious sample preparation, the objective of the study was to capture the metabolome in vivo, evaluate the feasibility of the approach to provide unbiased extraction coverage, and compare analytical precision when different SPME sampling modes are employed. The potential of in vivo DI-SPME in quantitative plant metabolomics was assessed by evaluating changes in metabolic fingerprints in response to fruit maturation. The in vivo SPME sampling approach has been demonstrated as capable of sampling living systems with high reproducibility, considering that nearly 50% of hundreds of evaluated compounds included in the determination of analytical performance met the 15% RSD FDA criterion. Esters were extracted with high repeatability (% RSD for hexyl butanoate and butyl butanoate of 16.5 and 5.9, respectively, from 9 determinations in 3 apples) and found to be upregulated in response to apple fruit maturation.
机译:首次采用直接浸入-固相微萃取(DI-SPME)的体内采样模式,以苹果(Malus x domestica Borkh。)为模型系统,捕获了活植物标本的代谢组。从苹果组织中提取代谢物,并通过热解吸将其引入全面的二维气相色谱-飞行时间质谱仪中。在全球代谢物分析中确定了这种基于微量萃取原理的采样方法的可行性,其中包括微量分析物浓度的可忽略消耗,无溶剂采样和样品制备以及现场相容性。该研究的目标不是采用传统的样品前处理方法,而是需要进行代谢猝灭和费力的样品前处理,而是在体内捕获代谢组,评估该方法提供无偏萃取范围的可行性,并比较不同SPME时的分析精度。采用采样模式。体内DI-SPME在植物定量代谢组学中的潜力通过评估响应于水果成熟的代谢指纹变化来评估。考虑到分析性能测定中包括的数百种被评估化合物中有近50%符合15%RSD FDA标准,体内SPME采样方法已被证明能够以高重现性对生命系统进行采样。以高重复性提取酯(从3个苹果中的9个测定中,丁酸己酯和丁酸丁酯的RSD分别为16.5和5.9%RSD),发现响应于苹果果实的成熟而被上调。

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