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Parallel Computation of 3D Morse-Smale Complexes

机译:3D Morse-Smale复合体的并行计算

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摘要

The Morse-Smale complex is a topological structure that captures the behavior of the gradient of a scalar function on a manifold. This paper discusses scalable techniques to compute the Morse-Smale complex of scalar functions defined on large three-dimensional structured grids. Computing the Morse-Smale complex of three-dimensional domains is challenging as compared to two-dimensional domains because of the non-trivial structure introduced by the two types of saddle criticalities. We present a parallel shared-memory algorithm to compute the Morse- Smale complex based on Forman's discrete Morse theory. The algorithm achieves scalability via synergistic use of the CPU and the GPU. We first prove that the discrete gradient on the domain can be computed independently for each cell and hence can be implemented on the GPU. Second, we describe a two-step graph traversal algorithm to compute the 1-saddle-2-saddle connections efficiently and in parallel on the CPU. Simultaneously, the extremasaddle connections are computed using a tree traversal algorithm on the GPU.
机译:Morse-Smale复数是一种拓扑结构,可捕获流形上标量函数的梯度行为。本文讨论了可伸缩技术,用于计算在大型三维结构化网格上定义的标量函数的摩尔斯-马累式复杂度。与二维域相比,计算二维域的Morse-Smale复合物具有挑战性,因为两种类型的鞍形临界引入了非平凡的结构。我们提出了一种基于Forman离散Morse理论的并行共享内存算法来计算Morse-Smale复合体。该算法通过CPU和GPU的协同使用来实现可伸缩性。我们首先证明,可以为每个单元独立地计算域上的离散梯度,因此可以在GPU上实现。其次,我们描述了一种两步图遍历算法,可以在CPU上高效且并行地计算1-saddle-2-saddle连接。同时,在GPU上使用树遍历算法计算极值连接。

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