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Forensic application of Epstein-Barr virus genotype: correlation between viral genotype and geographical area.

机译:爱泼斯坦-巴尔病毒基因型的法医学应用:病毒基因型与地理区域之间的相关性。

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摘要

Using 50 forensic blood samples, the latent membrane protein 2A (LMP-2A) gene of Epstein-Barr virus (EBV) DNA was amplified to find a geographic correlation among the EBV genotypes. EBV DNA was detected in nine samples. From a phylogenetic analysis using 18 reported sequences as a reference, six EBV subtypes (Ia, Ib, Ic IIa, IIb, and IIc) were found. Japanese isolates were included in subtypes Ia or IIa. All the Asian reference isolates, except isolate D6, were included in subtype Ia or IIa. Mediterranean, an Alaskan and other African isolates were included in types Ib, Ic, IIb and IIc. The EBV genotype in the LMP-2A gene was thus demonstrated as being correlated with the host's geographical location. Typing in the EBV-associated nuclear antigen 2 gene was not related to that in the LMP-2A gene. Detection of the EBV genotype in the LMP-2A gene may be useful for determining the geographical origins of unidentified cadavers.
机译:使用50个法医血液样本,扩增了爱泼斯坦-巴尔病毒(EBV)DNA的潜伏膜蛋白2A(LMP-2A)基因,以发现EBV基因型之间的地理相关性。在9个样品中检测到EBV DNA。通过使用18个报告的序列作为参考的系统发育分析,发现了6种EBV亚型(Ia,Ib,Ic IIa,IIb和IIc)。日本分离株包括在亚型Ia或IIa中。除分离株D6外,所有亚洲参考分离株均包含在Ia或IIa亚型中。地中海,阿拉斯加和其他非洲分离株包括在Ib,Ic,IIb和IIc类型中。 LMP-2A基因中的EBV基因型因此被证明与宿主的地理位置有关。与EBV相关的核抗原2基因的输入与LMP-2A基因的输入无关。 LMP-2A基因中EBV基因型的检测对于确定未鉴定尸体的地理起源可能有用。

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