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Phylogenetic relationship among various strains of Dunaliella(chlorophyceae) based on nuclear its rDNA sequences

机译:基于核仁rDNA序列的杜氏藻属不同菌株间的亲缘关系

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Phylogenetic analyses of 15 strains representing 8 taxa of Dunaliella (D. salina, D. bardawil, D. pseudosalina, D. tertiolecta, D. parva, D. viridis, D. peircei and D. lateralis) belonging to both subgenera and all sections of the genus were carried out using the sequences of the nuclear rDNA spacers (internal transcribed spacer [ITS-1 + ITS-2]). The ITS data agreed with the traditional data in that D. lateralis (from subgenus Pascheria) is only distantly related to the seven taxa of the subgenus Dunaliella. The ITS data also supported the monophyly of the subgenus Dunaliella. Within the subgenus Dunaliella, sequence data resolved five phylogenetic groups; some isolates of A parva and D. salina separated into different clades containing other species. For example, D. parva UTEK 1983 (section Dunaliella) grouped with D. viridis CONC 002 (section Virides); the former has more nucleotides in common with D. viridis (93.2% similarity) than to its conspecifics (85.6% similarity). Likewise, the strains of D. parva CCMP 362 and CCAP 19/9 (section Dunaliella), the three strains of D. tertiolecta (section Tertiolectae), and the one strain of D. peircei (section Peirceinae) formed a strong phylogenetic clade (99%-100% support). Dunaliella salina UTEX 200 is more closely related to D. pseudosalina CONC 010 than to its conspecifics (95% similarity), even though the two taxa differ markedly physiologically. The results revealed that D. parva UTEX 1983 has been misidentified and should be renamed as D. viridis. Similarly, the strains of D. parva CCAP 19/9 and CCMP 362 and the strain UTEX 2192 of D. peircei should be renamed as D. tertiolecta. More physiological and molecular work needs to be done to elucidate the correct taxonomic position of D. salina UTEX 200 and D. pseudosalina CONC 010. Finally, the high ITS sequence variability found among the various strains of D. salina underlines the importance of further work to elucidate the species status in this complex taxon.
机译:属于杜氏藻和所有科的代表杜氏藻8个分类单元的15个菌株的系统发育分析(盐藻,巴尔达维尔,假盐藻,畸形藻,小卵菌,绿孢菌,皮尔希氏菌和侧缘杜氏菌)使用核rDNA间隔子的序列(内部转录间隔子[ITS-1 + ITS-2])进行属的鉴定。 ITS数据与传统数据一致,即侧枝D.(来自Pascheria属)仅与Dunaliella属的七个分类群有很远的联系。 ITS数据还支持杜氏藻属的单生。在杜氏藻属下,序列数据解析了五个系统发育组。 A parva和D. salina的一些分离物分成包含其他物种的不同进化枝。例如,D.parva UTEK 1983(Dunaliella部分)与D. viridis CONC 002(Virides部分)分组;前者与D. viridis(93.2%的相似性)相比,与其同系物(85.6%的相似性)更多的核苷酸相同。同样地,D.parva CCMP 362和CCAP 19/9菌株(杜纳利氏菌科),三株D.tertiolecta菌株(Teriolectae科)和一株D.peircei菌株(Peirceinae科)形成了坚固的系统进化枝( 99%-100%支持)。杜氏盐藻UTEX 200与拟南芥CONC 010的同源性更高(相似度为95%),尽管这两个类群在生理上明显不同。结果表明,D。parva UTEX 1983被误认,应重命名为D. viridis。同样,D。parva CCAP 19/9和CCMP 362的菌株以及D. peircei的UTEX 2192菌株应重命名为D. tertiolecta。需要做更多的生理和分子工作来阐明D. salina UTEX 200和D. pseudosalina CONC 010的正确分类学位置。最后,在D. salina的各种菌株中发现的高ITS序列变异性强调了进一步工作的重要性阐明此复杂分类中的物种状态。

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