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Differentiation between a pathogenic and a non-pathogenic form of Gyrodactylus safaris using PCR-RFLP

机译:利用PCR-RFLP鉴别法氏假单胞菌的致病性和非致病性形式

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Forms of the monogenean ectoparasite Gyrodactylus salaris Malmberg (found in Norway and Sweden) are highly pathogenic to East-Atlantic salmon, Salmo salar L., colonizing rivers draining into the Atlantic. Several salmon stocks in Europe are as susceptible and vulnerable as Norwegian salmon, which is the background for implementation of countermeasures against further spreading of the parasite in Europe (Peeler 2004). Scottish, Irish and Danish salmon will allow marked parasite population increase following exposure to some of the Norwegian forms of the parasite whereas Russian, Finnish and Swedish salmon show limited susceptibility (Lindenstr0m, Sigh, Dalgaard & Buchmann 2006). Current methods for diagnosis of the species are based on light microscopic examination of parasite mounts, DNA sequencing of various genes or polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) (rDNA). The PCR-RFLP method is based on differences in the DNA banding pattern obtained following PCR amplification of the internal transcribed spacer (ITS) region (1300 bp) in the parasite and subsequent digestion by specific restriction enzymes (Cunningham 1997). This will allow differentiation between different species within the genus Gyrodactylus but it can not differentiate between forms within the parasite species G. salaris. The recent discovery in Denmark of a non-pathogenic form of G. salaris has implications for management of disease-free zones in Europe (Jorgensen, Larsen, Kania, J0rgensen, Bresciani & Buchmann 2006) and the availability of a reliable diagnostic system for detection of this form is needed. The present work exploits the detection of a mutation in the ITS region of the non-pathogenic form of the parasite and the subsequent development of a PCR-RFLP method for differentiation between the pathogenic and non-pathogenic forms.
机译:单一种类的外寄生Gyrodactylus salaris Malmberg(在挪威和瑞典发现)的形式对东大西洋鲑鱼Salmo salar L.具有高度致病性,使流向大西洋的河流定居。欧洲的一些鲑鱼种群与挪威鲑鱼一样易感和脆弱,这是在欧洲实施进一步防止寄生虫扩散的对策的背景(Peeler 2004)。苏格兰,爱尔兰和丹麦鲑鱼在暴露于挪威的某些形式的寄生虫后将使寄生虫种群显着增加,而俄罗斯,芬兰和瑞典鲑鱼显示出有限的易感性(Lindenstr0m,Sigh,Dalgaard和Buchmann 2006)。当前诊断该物种的方法是基于对寄生虫坐骑的光学显微镜检查,各种基因的DNA测序或聚合酶链反应-限制性片段长度多态性(PCR-RFLP)(rDNA)。 PCR-RFLP方法基于对寄生虫内部转录间隔区(ITS)区域(1300 bp)进行PCR扩增并随后通过特异性限制酶消化后获得的DNA条带模式的差异(Cunningham 1997)。这将允许在陀螺内的不同物种之间进行区分,但是不能区分在寄生虫G. salaris内的形式之间。丹麦最近发现的一种非致病性的沙门氏菌对欧洲无病区的管理具有影响(Jorgensen,Larsen,Kania,Jrrgensen,Bresciani&Buchmann 2006)以及可靠的检测诊断系统的可用性需要这种形式的。本工作利用了在非致病性形式的寄生虫的ITS区域中检测突变的方法,并随后开发了用于区分致病性和非致病性形式的PCR-RFLP方法。

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