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首页> 外文期刊>Journal of Computational Chemistry: Organic, Inorganic, Physical, Biological >Molecular tailoring approach in conjunction with MP2 and RI-MP2 codes: A comparison with fragment molecular orbital method
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Molecular tailoring approach in conjunction with MP2 and RI-MP2 codes: A comparison with fragment molecular orbital method

机译:结合MP2和RI-MP2代码的分子剪裁方法:与片段分子轨道方法的比较

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Many Divide-and-Conquer based approaches are being developed to overcome the high scaling problem of the ab initio methods. In this work, one such method, Molecular Tailoring Approach (MTA) has been interfaced with recently developed efficient M?ller-Plesset second order perturbation theory (MP2) codes viz. IMS-MP2 and RIMP2 to reap the advantage of both. An external driver script is developed for implementing MTA at the front-end and the MP2 codes at the back-end. The present version of the driver script is written only for a single point energy evaluation of a molecular system at a fixed geometry. The performance of these newly developed MTA-IMS-MP2 and MTA-RI-MP2 codes is extensively benchmarked for a variety of molecular systems vis-à-vis the corresponding actual runs. In addition to this, the performance of these programs is also critically compared with Fragment Molecular Orbital (FMO), another popular fragment-based method. It is observed that FMO2/2 is superior to FMO3/2 and MTA with respect to time advantage; however, the errors of FMO2 are much beyond chemical accuracy. However, FMO3/2 is a highly accurate method for biological systems but is unsuccessful in case of water clusters. MTA produces estimates with errors within 1 kcal/mol uniformly for all systems with reasonable time advantage. Analysis carried out employing various basis sets shows that FMO gives its optimum performance only for basis sets, which does not include diffuse functions. On the contrary, MTA performance is found to be similar for any basis set used.
机译:正在开发许多基于分治法的方法来克服从头算方法的高比例缩放问题。在这项工作中,一种这样的方法,分子剪裁法(MTA)已与最近开发的有效Müller-Plesset二阶摄动理论(MP2)代码对接。 IMS-MP2和RIMP2两者都获得了优势。开发了一个外部驱动程序脚本,用于在前端实现MTA,在后端实现MP2代码。当前版本的驱动程序脚本仅用于在固定几何形状下对分子系统的单点能量评估。这些新开发的MTA-IMS-MP2和MTA-RI-MP2代码的性能已针对各种分子系统(相对于相应的实际运行)进行了广泛的基准测试。除此之外,这些程序的性能还与另一个流行的基于片段的方法片段分子轨道(FMO)进行了严格比较。可以看出,就时间优势而言,FMO2 / 2优于FMO3 / 2和MTA。但是,FMO2的误差远远超出化学准确性。但是,FMO3 / 2是用于生物系统的高度精确的方法,但是在水簇的情况下是不成功的。对于具有合理时间优势的所有系统,MTA均匀地产生误差在1 kcal / mol以内的估计。使用各种基础集进行的分析表明,FMO仅针对不包含扩散函数的基础集提供了最佳性能。相反,发现对于使用的任何基础集,MTA的性能都相似。

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