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Kirkwood-Buff Coarse-Grained Force Fields for Aqueous Solutions

机译:水溶液的柯克伍德-巴夫粗粒力场

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We present an approach to systematically coarse-grain liquid mixtures using the fluctuation solution theory of Kirkwood and Buff in conjunction with the iterative Boltzmann inversion method. The approach preserves both the liquid structure at pair level and the dependence of solvation free energies on solvent composition within a unified coarse-graining framework To test the robustness of our approach, we simulated urea-water and benzene-water systems at different concentrations. For urea-water, three different coarse-grained potentials were developed at different urea concentrations, in order to extend the simulations of urea-water mixtures up to 8 molar urea concentration. In spite of their inherent state point dependence, we find that the single-site models for urea and water are transferable in concentration windows of approximately 2 M. We discuss the development and application of these solvent models in coarse-grained biomolecular simulations.
机译:我们提出了一种使用Kirkwood和Buff的波动解理论以及迭代Boltzmann反演方法来系统地处理粗粒液体混合物的方法。该方法在统一的粗粒度框架内保留了成对水平的液体结构和溶剂自由能对溶剂组成的依赖性。为测试方法的鲁棒性,我们在不同浓度下模拟了尿素-水和苯-水系统。对于尿素水,在不同的尿素浓度下开发了三种不同的粗粒度电势,以扩展对尿素水混合物的模拟,使尿素浓度达到8摩尔。尽管它们固有的状态点依赖性,我们发现尿素和水的单点模型可以在大约2 M的浓度窗口中转移。我们讨论了这些溶剂模型在粗粒生物分子模拟中的开发和应用。

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