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首页> 外文期刊>Diseases of Aquatic Organisms >Development of PCR-based methods for detection of Sphaerothecum destruens in fish tissues.
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Development of PCR-based methods for detection of Sphaerothecum destruens in fish tissues.

机译:开发基于PCR的方法检测鱼组织中的球形芽孢杆菌。

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摘要

Single-round and nested polymerase chain reaction (PCR) tests were developed for amplification of a 434 bp fragment of the small subunit ribosomal RNA (18S rRNA) gene from Sphaerothecum destruens, previously known as the rosette agent, an intracellular parasite of salmonid fishes. Both tests have successfully amplified S. destruens-specific DNA from different isolates of S. destruens but not from related organisms. The limits of detection using the nested PCR test were 1 pg for purified S. destruens genomic DNA and 0.1 fg for plasmid DNA. We conducted 2 experimental transmission studies, consisting of injection or waterborne exposure of juvenile winter-run Chinook salmon Oncorhynchus tshawytscha to spore stages of the parasite. In the injection study, parasite DNA was detected in 100% of kidney samples from exposed fish (n=83) at 1 and 3 mo post-exposure using nested PCR, versus 98% using microscopic analysis of Gram-stained impression smears made from the kidney. Following waterborne exposure, fish were sampled over the course of a year. From each fish, samples of gill, liver, posterior intestine and kidney were analyzed. S. destruens-specific DNA was detected most often in gill and kidney over the course of the experiment, and 71% (64/90) of the exposed fish were identified as positive for S. destruens using the nested PCR test, versus 16% (14/90) using microscopic analysis of Gram-stained kidney smears. Natural infections in captive broodstock of adult winter-run Chinook salmon, originally diagnosed by examination of Gram-stained kidney smears, were confirmed using the nested PCR test in all fish examined (15/15). Further, the nested test amplified parasite-specific DNA from other tissues in these fish with varying frequencies. This report introduces the first DNA-based detection method for S. destruens, to be used alone as a diagnostic tool or in conjunction with histologic tests for confirmatory identification of the parasite.
机译:开发了单轮和巢式聚合酶链反应(PCR)测试,用于扩增来自Sphaerothecum destruens的小亚基核糖体RNA(18S rRNA)基因的434 bp片段,该基因以前被称为玫瑰花结剂,是鲑鱼的细胞内寄生虫。两种测试均已成功地从不同的分离的链球菌中扩增出了链球菌的特异DNA,但并未从相关生物中扩增出。使用巢式PCR测试的检测限为纯化的链球菌基因组DNA为1 pg,质粒DNA为0.1 fg。我们进行了2个实验性传播研究,包括注射或水生幼虫冬季运行的契努克鲑鱼Oncorhynchus tshawytscha到寄生虫的孢子阶段。在注射研究中,使用巢式PCR在暴露后1个月和3个月内,在暴露的鱼类(n = 83)的100%肾脏样品中检出了寄生虫DNA,而使用显微镜对革兰氏染色印象涂片进行的显微镜分析则发现了98%肾。暴露于水后,在一年的时间内对鱼进行了采样。从每条鱼中分析analyzed,肝,后肠和肾脏的样本。在整个实验过程中,des和链球菌最常在g和肾脏中检测到DNA,通过巢式PCR测试,将71%(64/90)的裸露鱼类对des链球菌呈阳性,而16% (14/90)使用革兰氏染色肾涂片的显微镜分析。使用巢式PCR试验在所有受检鱼类中证实了成年冬季饲养的奇努克鲑鱼圈养亲鱼的自然感染,最初是通过检查革兰氏染色的肾涂片检查确诊的(15/15)。此外,巢式测试以不同的频率从这些鱼类的其他组织中扩增了寄生虫特异性DNA。本报告介绍了第一种基于DNA的链球菌检测方法,该方法可单独用作诊断工具,也可与组织学检测结合使用以鉴定寄生虫。

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