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Gene × environment interaction studies have not properly controlled for potential confounders: The problem and the (simple) solution

机译:基因×环境相互作用研究尚未适当控制潜在的混杂因素:问题和(简单的)解决方案

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摘要

Candidate gene × environment (G × E) interaction research tests the hypothesis that the effects of some environmental variable (e.g., childhood maltreatment) on some outcome measure (e.g., depression) depend on a particular genetic polymorphism. Because this research is inherently nonexperimental, investigators have been rightly concerned that detected interactions could be driven by confounders (e.g., ethnicity, gender, age, socioeconomic status) rather than by the specified genetic or environmental variables per se. In an attempt to eliminate such alternative explanations for detected G × E interactions, investigators routinely enter the potential confounders as covariates in general linear models. However, this practice does not control for the effects these variables might have on the G × E interaction. Rather, to properly control for confounders, researchers need to enter the covariate × environment and the covariate × gene interaction terms in the same model that tests the G × E term. In this manuscript, I demonstrate this point analytically and show that the practice of improperly controlling for covariates is the norm in the G × E interaction literature to date. Thus, many alternative explanations for G × E findings that investigators had thought were eliminated have not been.
机译:候选基因与环境(G×E)相互作用的研究检验了以下假设:某些环境变量(例如,童年时期的虐待)对某种结局指标(例如,抑郁症)的影响取决于特定的遗传多态性。由于这项研究本质上是非实验性的,因此研究人员正确地担心所检测到的相互作用可能是由混杂因素(例如种族,性别,年龄,社会经济地位)驱动的,而不是由特定的遗传或环境变量本身驱动的。为了消除对检测到的G×E相互作用的此类替代解释,研究人员通常将潜在的混杂因素作为一般线性模型中的协变量输入。但是,这种做法无法控制这些变量可能对G×E相互作用产生的影响。相反,要正确控制混杂因素,研究人员需要在测试G×E项的同一模型中输入协变量×环境和协变量×基因相互作用项。在本手稿中,我通过分析证明了这一点,并表明迄今为止,不恰当地控制协变量的做法是G×E交互作用文献中的常态。因此,尚未发现研究人员认为已消除的关于G×E发现的许多替代解释。

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