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Genetic detection of Babesia bigemina from Mongolian cattle using apical membrane antigen-1 gene-based PCR assay

机译:基于顶端膜抗原1基因的PCR检测法从蒙古牛中遗传双歧杆菌

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We developed a new nested PCR (nPCR) assay based on the Babesia bigemina apical membrane antigen-1 (AMA-1) gene sequence for parasite-specific detection. The primers were designed to amplify 738-bp and 211-bp fragments of the AMA-1 gene by primary and nested PCRs, respectively. The assay was proven to be specific for the B. bigemina, whereas the previously established Spel-AvaI nPCR assay amplified not only the target fragment of B. bigemina but also a homologous one from Babesia ovata. The AMA-1 nPCR assay was also evaluated using field DNA samples extracted from 266 bovine blood samples collected from Mongolia in 2010. In a comparative evaluation, 90(33.8%) and 25(9.4%) of the blood samples showed positive reactions for B. bigemina by the Spel-AvaI nPCR and AMA-1 nPCR assays, respectively. The sequencing analysis of the nPCR products confirmed that the AMA-1 nPCR method had specifically detected the target B. bigemina DNA. However, 4 different kinds of sequences were determined among the Spel-AvaI nPCR amplicons. Two of them were derived from B. bigemina and B. ovata, while the origins of the others were unknown. In the current study, the presence of B. bigemina was clearly demonstrated among Mongolian cattle populations by the current nPCR assay for the first time. Furthermore, our findings also indicate that the AMA-1 nPCR assay may be a useful diagnostic tool for the specific detection of B. bigemina.(C) 2012 Elsevier B.V. All rights reserved.
机译:我们开发了一种基于巴贝斯虫大生殖器顶膜抗原-1(AMA-1)基因序列的新型巢式PCR(nPCR)检测方法,用于寄生虫特异性检测。设计引物分别通过一级和嵌套式PCR扩增AMA-1基因的738-bp和211-bp片段。该测定被证明对双歧杆菌具有特异性,而先前建立的Spel-AvaI nPCR检测不仅扩增了双歧杆菌的靶片段,而且还扩增了卵形贝贝菌的同源片段。还使用从2010年从蒙古采集的266份牛血样品中提取的现场DNA样品评估了AMA-1 nPCR分析。在比较评估中,90(33.8%)和25(9.4%)的血液样品显示出对B的阳性反应分别通过Spel-AvaI nPCR和AMA-1 nPCR测定法检测双歧杆菌。对nPCR产物的测序分析证实AMA-1 nPCR方法已特异性检测了目标双歧杆菌DNA。但是,在Spel-AvaI nPCR扩增子中确定了4种不同的序列。其中两个来自双歧杆菌和卵形双歧杆菌,而其他来源则未知。在当前的研究中,首次通过当前的nPCR分析清楚地证明了在蒙古牛种群中存在双歧杆菌。此外,我们的发现还表明AMA-1 nPCR分析可能是特异性检测大双歧杆菌的有用诊断工具。(C)2012 Elsevier B.V.保留所有权利。

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