首页> 外文期刊>Carbohydrate research >RELATIVE STABILITY OF ALTERNATIVE CHAIR FORMS AND HYDROXYMETHYL CONFORMATIONS OF BETA-D-GLUCOPYRANOSE [Review]
【24h】

RELATIVE STABILITY OF ALTERNATIVE CHAIR FORMS AND HYDROXYMETHYL CONFORMATIONS OF BETA-D-GLUCOPYRANOSE [Review]

机译:β-D-葡糖基戊糖替代性椅子形式的相对稳定性和羟甲基构型[综述]

获取原文
获取原文并翻译 | 示例
           

摘要

The relative energies of two hydroxymethyl conformers for each of the two chair forms (C-4(1) and C-1(4)) of beta-D-glucose were calculated at much more complete levels of quantum mechanical (QM) electronic structure theory than previously, and relative free energies in solution were calculated by adding vibrational, rotational, and solvent effects. The I:as-phase results are based on very large basis sets (up to 624 contracted basis functions), and the coupled cluster method for electron correlation. Solvation Model 4 was used to calculate the effects of hydration or nonpolar solvation. Molecular mechanics (MM) and QM electronic structure theory have been applied to analyze the factors contributing to the relative energies of these conformers. Relative energies varied widely (up to 35 kcal/mol) depending on theoretical level, and several levels of theory predict the experimentally unobserved C-1(4) ring conformation to be the lower in energy. The highest level calculations predict the C-4(1) chair to be lower in free energy by about 8 kcal/mol, and we also find that the gauche (+) (gt) conformer of C-4(1) is lower than the trans (tg) conformer. Low-energy structures optimized by either quantum mechanical or molecular mechanical methods were commonly characterized by multiple intramolecular hydrogen bonds. Superior hydrogen bonding geometries are available in the C-1(4) chair, but are counteracted by increased steric repulsions between axial substituents; MM calculations also indicate increased torsional strain in the C-1(4) chair. Manifestations of greater steric strain in the calculated C-1(4) structures compared to the C-4(1), structures include longer ring bonds, a larger bond angle at the ring oxygen atom, and smaller puckering amplitudes. The MM and QM C-4(1) structures compare well with each Ether and with available X-ray diffraction data. The largest discrepancies between the two kinds of models occur for geometric parameters associated with the anomeric center - the QM structure agrees better with experiment. Greater differences between QM and MM structures are observed for C-1(4) structures, especially in the relative orientations of hydroxyl groups serving as hydrogen bond accepters. In water, the C-4(1) chairs are better solvated than the C-1(4) chairs by about 5 to 9 kcal/mol because of both larger polarization free energies and improved hydrogen bonding interactions with the first solvation shell. In (a hypothetical) n-hexadecane solution, the C-4(1) chairs are better solvated by about 2 to 4 kcal/mol both because of larger polarization free energies and because the larger solvent accessible surface areas of the C-4(1) conformers allow increased favorable dispersion interactions. The differential polarization free energies are associated primarily with the hydroxyl groups; the greater steric congestion in the C-1(4) chairs reduces opportunities for favorable dielectric screening. [References: 132]
机译:对于β-D-葡萄糖的两种椅子形式(C-4(1)和C-1(4))中的每一种,两个羟甲基构象异构体的相对能量是在更完整的量子力学(QM)电子结构水平下计算的与以前的理论相比,溶液的相对自由能是通过添加振动,旋转和溶剂效应来计算的。 I:as-phase结果基于非常大的基集(最多624个收缩基函数)以及电子相关性的耦合簇方法。溶剂化模型4用于计算水合或非极性溶剂化的影响。分子力学(MM)和QM电子结构理论已被用于分析影响这些构象异构体相对能量的因素。相对能量的变化范围很大(最高35 kcal / mol),具体取决于理论水平,并且一​​些理论水平预测,实验中未观察到的C-1(4)环构象的能量较低。最高级别的计算预测C-4(1)椅子的自由能降低约8 kcal / mol,我们还发现C-4(1)的薄纱(+)(gt)构象异构体低于反式(tg)构象体。通过量子力学或分子力学方法优化的低能结构通常以多个分子内氢键为特征。 C-1(4)座椅具有出色的氢键键合几何形状,但可通过增加轴向取代基之间的空间斥力来抵消; MM计算还表明C-1(4)座椅的扭转应变增加。与C-4(1)相比,在计算的C-1(4)结构中表现出更大的空间应变,该结构包括更长的环键,在环氧原子处更大的键角和更小的起皱幅度。 MM和QM C-4(1)结构与每个以太币和可用的X射线衍射数据都有很好的比较。两种模型之间最大的差异发生在与异头异构体中心相关的几何参数上-QM结构与实验更吻合。对于C-1(4)结构,尤其是在用作氢键受体的羟基的相对方向上,观察到QM和MM结构之间的差异更大。在水中,C-4(1)椅比C-1(4)椅的溶剂化效果更好,约为5至9 kcal / mol,这是因为较大的极化自由能和与第一个溶剂化壳的氢键相互作用都得到了改善。在(假设的)正十六烷溶液中,C-4(1)椅子的溶剂化能力更好,约为2-4 kcal / mol,这是因为极化自由能更大,并且C-4(1)的溶剂可及表面积更大1)构象异构体允许增加有利的分散相互作用。差分极化自由能主要与羟基有关; C-1(4)椅子的较大空间拥堵减少了进行良好介电屏蔽的机会。 [参考:132]

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号