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EpViX: A cloud-based tool for epitope reactivity analysis and epitope virtual crossmatching to identify low immunologic risk donors for sensitized recipients

机译:EpViX:一种基于云的工具,用于表位反应性分析和表位虚拟交叉匹配,以识别致敏受体的低免疫学风险供体

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摘要

One of the challenges facing solid organ transplantation programs globally is the identification of low immunological risk donors for sensitized recipients by HLA allele genotype. Because recognition of donor HLA alleles by host antibodies is at the core of organ rejection, the objective of this work was to develop a new version of the EpHLA software, named EpViX, which uses an HLAMatchmaker algorithm and performs automated epitope virtual crossmatching at the initiation of the organ donation process. EpViX is a free, web-based application developed for use over the internet on a tablet, smartphone or computer. This program was developed using the Ruby programming language and the Ruby-on-Rails framework. To improve the user experience, the EpViX software interface was developed based on the best human-computer interface practices. To simplify epitope analysis and virtual crossmatching, the program was integrated with important available web-based resources, such as OPTN, IMGT/HLA and the International HLA Epitope Registry. We successfully developed a program that allows people to work collaboratively and effectively during the donation process by accurately predicting negative crossmatches, saving time and other resources. (C) 2015 Published by Elsevier B.V.
机译:全球实体器官移植计划面临的挑战之一是通过HLA等位基因基因型识别致敏受体的低免疫危险性供体。因为宿主抗体识别供体HLA等位基因是器官排斥的核心,所以这项工作的目的是开发新版本的EpHLA软件,名为EpViX,该软件使用HLAMatchmaker算法并在启动时执行自动表位虚拟交叉匹配器官捐赠过程EpViX是一款免费的基于Web的应用程序,开发用于在平板电脑,智能手机或计算机上通过Internet使用。该程序是使用Ruby编程语言和Ruby-on-Rails框架开发的。为了改善用户体验,EpViX软件界面是根据最佳的人机界面实践开发的。为了简化表位分析和虚拟交叉匹配,该程序与重要的基于Web的可用资源集成在一起,例如OPTN,IMGT / HLA和国际HLA表位注册处。我们成功开发了一个程序,通过准确预测负面的交叉比对,节省时间和其他资源,使人们可以在捐赠过程中进行有效协作。 (C)2015由Elsevier B.V.发布

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