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A model-based strategy to investigate the role of microRNA regulation in cancer signalling networks

机译:基于模型的策略,研究microRNA调控在癌症信号网络中的作用

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In this paper we present and discuss a model-based approach to link miRNA translational control with cell signalling networks. MicroRNAs are small regulatory RNAs that are able to regulate the activity and the stability of specific messenger RNA and have been implicated in tumour progression due to their ability to translationally regulate critical oncogenes and tumour suppressors. In our approach, data on protein-protein interactions and miRNA regulation, obtained from bioinformatics databases, are integrated with quantitative experimental data using mathematical modelling. Predictive computational simulations and qualitative (bifurcation) analyses of those mathematical models are employed to further support the investigation of such multifactorial networks in the context of cancer progression. We illustrate our approach with the C-Myc/E2F signalling network, involved in the progression of several tumour subtypes, including colorectal cancer.
机译:在本文中,我们介绍并讨论了一种基于模型的方法来将miRNA翻译控制与细胞信号网络联系起来。微小RNA是能够调节特定信使RNA的活性和稳定性的小型调节RNA,并且由于它们具有翻译性调节关键癌基因和肿瘤抑制子的能力而与肿瘤进展有关。在我们的方法中,将从蛋白质信息学数据库获得的蛋白质-蛋白质相互作用和miRNA调控数据与使用数学建模的定量实验数据集成在一起。这些数学模型的预测性计算仿真和定性(分叉)分析被用来进一步支持在癌症进展过程中对此类多因素网络的研究。我们用C-Myc / E2F信号网络说明了我们的方法,该网络参与了几种肿瘤亚型的发展,包括结直肠癌。

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