首页> 外文期刊>The Journal of Chemical Physics >LINEAR SCALING CONJUGATE GRADIENT DENSITY MATRIX SEARCH AS AN ALTERNATIVE TO DIAGONALIZATION FOR FIRST PRINCIPLES ELECTRONIC STRUCTURE CALCULATIONS
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LINEAR SCALING CONJUGATE GRADIENT DENSITY MATRIX SEARCH AS AN ALTERNATIVE TO DIAGONALIZATION FOR FIRST PRINCIPLES ELECTRONIC STRUCTURE CALCULATIONS

机译:线性缩放共轭梯度密度矩阵搜索作为第一原理电子结构计算的对角化的替代方法

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摘要

Advances in the computation of the Coulomb, exchange, and correlation contributions to Gaussian-based Hartree-Fock and density functional theory Hamiltonians have demonstrated near-linear scaling with molecular size for these steps. These advances leave the O(N-3) diagonalization bottleneck as the rate determining step for very large systems. In this work, a conjugate gradient density matrix search (CG-DMS) method has been successfully extended and computationally implemented for use with first principles calculations. A Cholesky decomposition of the overlap matrix and its inverse is used to transform to and back from an orthonormal basis, which can be formed in near-linear time for sparse systems. Linear scaling of CPU time for the density matrix search and crossover of CPU time with diagonalization is demonstrated for polyglycine chains containing up to 493 atoms and water clusters up to 900 atoms. (C) 1997 American Institute of Physics. [References: 45]
机译:对基于高斯的Hartree-Fock和密度泛函理论哈密顿量的库仑,交换和相关贡献的计算进展表明,这些步骤的分子大小接近线性。这些进步使O(N-3)对角化瓶颈成为非常大型系统的速率确定步骤。在这项工作中,共轭梯度密度矩阵搜索(CG-DMS)方法已成功扩展并通过计算实现,可用于第一性原理计算。重叠矩阵及其逆的Cholesky分解用于在正交基础上来回变换,对于稀疏系统,它可以在接近线性的时间内形成。对于包含多达493个原子的聚甘氨酸链和多达900个原子的水簇,证明了用于密度矩阵搜索的CPU时间的线性缩放以及对角化对CPU时间的交叉影响。 (C)1997美国物理研究所。 [参考:45]

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